RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 RNF165Q6ZSG1 346 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 Q6ZSR9 355 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 Q6ZT83 130 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 BHLHA15Q7RTS1 189 aaPredicted RBP8.15□□□□□ -1.1
HDDC3-204ENST00000559834 ZAR1Q86SH2 424 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 P2RY8Q86VZ1 359 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 TDRPQ86YL5 185 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 NATD1Q8N6N6 113 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 BANPQ8N9N5 519 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 ATP6V1C2Q8NEY4 427 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 FBXO27Q8NI29 283 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 FBXO30Q8TB52 745 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 ADAMTS15Q8TE58 950 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 RADILQ96JH8 1075 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 MRGPRX4Q96LA9 322 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 C16orf45Q96MC5 204 aaPredicted RBP8.15□□□□□ -1.1
HDDC3-204ENST00000559834 HS6ST2Q96MM7 605 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 PRPF18Q99633 342 aaKnown RBP8.15□□□□□ -1.1
HDDC3-204ENST00000559834 RHNO1Q9BSD3 238 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 TRMOQ9BU70 441 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 GRIP2Q9C0E4 1043 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 SLCO5A1Q9H2Y9 848 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 YAE1D1Q9NRH1 226 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 CISD1Q9NZ45 108 aaKnown RBP8.15□□□□□ -1.1
HDDC3-204ENST00000559834 BAIAP2L1Q9UHR4 511 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 MID2Q9UJV3 735 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 EMCNQ9ULC0 261 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 ACTL7BQ9Y614 415 aa8.15□□□□□ -1.1
HDDC3-204ENST00000559834 PRR14LQ5THK1 2151 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 CHD3Q12873 2000 aaKnown RBP8.14□□□□□ -1.11
HDDC3-204ENST00000559834 DPRXA6NFQ7 191 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 RNF212BA8MTL3 300 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 EFNA2O43921 213 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 EIF4E2O60573 245 aaKnown RBP8.14□□□□□ -1.11
HDDC3-204ENST00000559834 PLIN3O60664 434 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 NTN1O95631 604 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 LINC00032P0C843 101 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 PRKCAP17252 672 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ENPP1P22413 925 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 MAPK1P28482 360 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 SHC1P29353 583 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 SLC7A1P30825 629 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ACVR1BP36896 505 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 HPCAL1P37235 193 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 CDKN1AP38936 164 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 CCT3P49368 545 aaKnown RBP8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ATP12AP54707 1039 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ZNF117Q03924 483 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 BSPH1Q075Z2 132 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 KRTAP1-1Q07627 177 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 RASGEF1BQ0VAM2 473 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 FAPQ12884 760 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 FOXF1Q12946 379 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 SELENBP1Q13228 472 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 LASP1Q14847 261 aaKnown RBP8.14□□□□□ -1.11
HDDC3-204ENST00000559834 TSC22D1Q15714 1073 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 NRF1Q16656 503 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 LSM12Q3MHD2 195 aaKnown RBP8.14□□□□□ -1.11
HDDC3-204ENST00000559834 EXOSC6Q5RKV6 272 aaKnown RBP8.14□□□□□ -1.11
HDDC3-204ENST00000559834 AGAP6Q5VW22 663 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 LIPMQ5VYY2 423 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 CDC73Q6P1J9 531 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 BHLHB9Q6PI77 547 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 CBLN3Q6UW01 205 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 HIPK1Q86Z02 1210 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ZNF619Q8N2I2 560 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 MAPK1IP1LQ8NDC0 245 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 TOR1AIP2Q8NFQ8 470 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 OR56A1Q8NGH5 318 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 OR5W2Q8NH69 310 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 GPR119Q8TDV5 335 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ZFP90Q8TF47 636 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 TMEM158Q8WZ71 300 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 CDS1Q92903 461 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 FAM120BQ96EK7 910 aaKnown RBP8.14□□□□□ -1.11
HDDC3-204ENST00000559834 FCRL1Q96LA6 429 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ADAD1Q96M93 576 aaKnown RBP8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ACTRT3Q9BYD9 372 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 SRXN1Q9BYN0 137 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 TRIM2Q9C040 744 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 PPCSQ9HAB8 311 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 BCO1Q9HAY6 547 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 TNFRSF12AQ9NP84 129 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 SERINC1Q9NRX5 453 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ATAD3AQ9NVI7 634 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ATP6V1HQ9UI12 483 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ICAM5Q9UMF0 924 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 CARD8Q9Y2G2 431 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 FIS1Q9Y3D6 152 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 DTNAQ9Y4J8 743 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 MAGED1Q9Y5V3 778 aaPredicted RBP8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ABCA1O95477 2261 aa8.14□□□□□ -1.11
HDDC3-204ENST00000559834 ZNF724A8MTY0 619 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 A8MV72 311 aaPredicted RBP8.13□□□□□ -1.11
HDDC3-204ENST00000559834 ZNF814B7Z6K7 855 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 COPEO14579 308 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 LSM1O15116 133 aaKnown RBP8.13□□□□□ -1.11
HDDC3-204ENST00000559834 ZNF264O43296 627 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 TRIM13O60858 407 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 ADAM11O75078 769 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms