RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 ZNF232Q9UNY5 417 aa19.67■□□□□ 0.74
SNX1-206ENST00000559389 A0A087WZY1 265 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 A0A1B0GTH9 108 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 C7orf72A4D263 438 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 AQP7O14520 342 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 OPN1SWP03999 348 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 DMTNQ08495 405 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 SAMD4BQ5PRF9 694 aaKnown RBP19.66■□□□□ 0.74
SNX1-206ENST00000559389 ARHGAP11AQ6P4F7 1023 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 COMTD1Q86VU5 262 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 ARMC8Q8IUR7 673 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 CLIP4Q8N3C7 705 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 TAMM41Q96BW9 452 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 SPRR3Q9UBC9 169 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 VDAC3Q9Y277 283 aa19.66■□□□□ 0.74
SNX1-206ENST00000559389 FAM47E-STBD1D6RA91 191 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 M0QX08 132 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 ADAM11O75078 769 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 NUDT14O95848 222 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 EPPINO95925 133 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 LINGO3P0C6S8 592 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 HSD17B1P14061 328 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 ZNF17P17021 662 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 TCEA1P23193 301 aaKnown RBP19.65■□□□□ 0.74
SNX1-206ENST00000559389 GFRA1P56159 465 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 B3GALT5-AS1P59052 145 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 BNIP1Q12981 228 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 CBFBQ13951 182 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 IGFBP7Q16270 282 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 TMEM44Q2T9K0 475 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 GLYR1Q49A26 553 aaPredicted RBP19.65■□□□□ 0.74
SNX1-206ENST00000559389 ZNF605Q86T29 641 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 ZNF440Q8IYI8 595 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 GPR119Q8TDV5 335 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 SLC35B4Q969S0 331 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 CDRT15Q96T59 188 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 PINK1Q9BXM7 581 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 C1orf21Q9H246 121 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 ARMC7Q9H6L4 198 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 EXO5Q9H790 373 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 TAS2R1Q9NYW7 299 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 PACSIN3Q9UKS6 424 aa19.65■□□□□ 0.74
SNX1-206ENST00000559389 RPH3AQ9Y2J0 694 aaPredicted RBP19.65■□□□□ 0.74
SNX1-206ENST00000559389 OR14I1A6ND48 311 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 TPST1O60507 370 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 CD247P20963 164 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 HTR1EP28566 365 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 SLC6A8P48029 635 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 FOXF1Q12946 379 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 MRPL49Q13405 166 aaKnown RBP19.64■□□□□ 0.73
SNX1-206ENST00000559389 QPRTQ15274 297 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 FXNQ16595 210 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 SPATS1Q496A3 300 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 GLIPR1L2Q4G1C9 344 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 NHSL2Q5HYW2 709 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 RAET1LQ5VY80 246 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 ATCAYQ86WG3 371 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 RNF148Q8N7C7 305 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 BHLHE22Q8NFJ8 381 aaPredicted RBP19.64■□□□□ 0.73
SNX1-206ENST00000559389 TNIP2Q8NFZ5 429 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 GPR32P1Q8NGA4 272 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 ZBTB8AQ96BR9 441 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 ZNF524Q96C55 264 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 SFXN2Q96NB2 322 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 CD300AQ9UGN4 299 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 SLC6A5Q9Y345 797 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 KALRNO60229 2985 aa19.64■□□□□ 0.73
SNX1-206ENST00000559389 ETV2O00321 342 aaPredicted RBP19.63■□□□□ 0.73
SNX1-206ENST00000559389 FAAHO00519 579 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 CXCR6O00574 342 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 AP3D1O14617 1153 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 PRKCAP17252 672 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 PGCP20142 388 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 KDELR2P33947 212 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 GCKP35557 465 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 RBPJQ06330 500 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 CRYZQ08257 329 aaKnown RBP19.63■□□□□ 0.73
SNX1-206ENST00000559389 EPS8Q12929 822 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 TOMM34Q15785 309 aaPredicted RBP19.63■□□□□ 0.73
SNX1-206ENST00000559389 ZNF550Q7Z398 422 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 GTPBP8Q8N3Z3 284 aaPredicted RBP19.63■□□□□ 0.73
SNX1-206ENST00000559389 SMYD1Q8NB12 490 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 FIG4Q92562 907 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 SLC7A6OSQ96CW6 309 aaPredicted RBP19.63■□□□□ 0.73
SNX1-206ENST00000559389 NPAS1Q99742 590 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 PRPF19Q9UMS4 504 aaKnown RBP19.63■□□□□ 0.73
SNX1-206ENST00000559389 ZNF835Q9Y2P0 537 aa19.63■□□□□ 0.73
SNX1-206ENST00000559389 SPENQ96T58 3664 aaKnown RBP19.63■□□□□ 0.73
SNX1-206ENST00000559389 OR2M5A3KFT3 312 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 CFAP73A6NFT4 308 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 SYT5O00445 386 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 ZNHIT1O43257 154 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 NTN1O95631 604 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 ACTL6AO96019 429 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 PLA2G2AP14555 144 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 GGT1P19440 569 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 CHMP24386 653 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 PSMA4P25789 261 aaKnown RBP19.62■□□□□ 0.73
SNX1-206ENST00000559389 PTGS2P35354 604 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 KCNJ5P48544 419 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms