RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 GFRA1P56159 465 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 RPL38P63173 70 aaKnown RBP6.61□□□□□ -1.35
SPG11-213ENST00000558988 MRPS22P82650 360 aaKnown RBP6.61□□□□□ -1.35
SPG11-213ENST00000558988 PSG6Q00889 435 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 DECR1Q16698 335 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 NHSL2Q5HYW2 709 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 FAM71E1Q6IPT2 247 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 NOXRED1Q6NXP6 359 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 POMZP3Q6PJE2 187 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 SPNS3Q6ZMD2 512 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 FRMD7Q6ZUT3 714 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 MARCH3Q86UD3 253 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 EXOC3L1Q86VI1 746 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 DDIASQ8IXT1 998 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 DTX3Q8N9I9 347 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 ZPLD1Q8TCW7 415 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 GPR151Q8TDV0 419 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 PIK3R3Q92569 461 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 JADE3Q92613 823 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 CCDC126Q96EE4 140 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 DTNBP1Q96EV8 351 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 AMDHD1Q96NU7 426 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 SFXN3Q9BWM7 321 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 PINK1Q9BXM7 581 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 TBL1XR1Q9BZK7 514 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 STMN4Q9H169 189 aaPredicted RBP6.61□□□□□ -1.35
SPG11-213ENST00000558988 Q9N2J8 555 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 MYNNQ9NPC7 610 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 SH3BP4Q9P0V3 963 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 CLCF1Q9UBD9 225 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 BAIAP2L1Q9UHR4 511 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 GRID1Q9ULK0 1009 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 VDAC3Q9Y277 283 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 C2CD3Q4AC94 2353 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 MYO1GB0I1T2 1018 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 TMEM233B4DJY2 109 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 B4DXG7 233 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 CASKO14936 926 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 PDPK1O15530 556 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 RGS14O43566 566 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 ZIC3O60481 467 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 UTS2O95399 124 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 CHEK2O96017 543 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 UROSP10746 265 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 CPN1P15169 458 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 KLK2P20151 261 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 MSX2P35548 267 aaPredicted RBP6.6□□□□□ -1.35
SPG11-213ENST00000558988 PEX19P40855 299 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 ECI1P42126 302 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 CCT5P48643 541 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 CLK3P49761 638 aaKnown RBP6.6□□□□□ -1.35
SPG11-213ENST00000558988 DIO3P55073 304 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 CLDN18P56856 261 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 GAB1Q13480 694 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 SGCBQ16585 318 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 FXNQ16595 210 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 EXOC3L2Q2M3D2 409 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 CCDC153Q494R4 210 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 LIPMQ5VYY2 423 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 TMEM81Q6P7N7 255 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 VWA1Q6PCB0 445 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 MED12LQ86YW9 2145 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 C10orf107Q8IVU9 208 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 Q8N1Y9 231 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 CHDHQ8NE62 594 aaPredicted RBP6.6□□□□□ -1.35
SPG11-213ENST00000558988 OR2M3Q8NG83 312 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 OR2W6PQ8NHA6 318 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 ZFP28Q8NHY6 868 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 DUSP19Q8WTR2 217 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 FIG4Q92562 907 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 ZBTB9Q96C00 473 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 PPCDCQ96CD2 204 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 ERP27Q96DN0 273 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 ELP4Q96EB1 424 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 ZC3HAV1LQ96H79 300 aaKnown RBP6.6□□□□□ -1.35
SPG11-213ENST00000558988 SH3YL1Q96HL8 342 aaPredicted RBP6.6□□□□□ -1.35
SPG11-213ENST00000558988 ZNF845Q96IR2 970 aaPredicted RBP6.6□□□□□ -1.35
SPG11-213ENST00000558988 MECRQ9BV79 373 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 TXLNGYQ9BZA5 131 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 RTN4RQ9BZR6 473 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 OPN3Q9H1Y3 402 aaPredicted RBP6.6□□□□□ -1.35
SPG11-213ENST00000558988 PTGES2Q9H7Z7 377 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 LRTM1Q9HBL6 345 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 SDHAF3Q9NRP4 125 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 C1orf109Q9NX04 203 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 KLHL28Q9NXS3 571 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 C6orf203Q9P0P8 240 aaPredicted RBP6.6□□□□□ -1.35
SPG11-213ENST00000558988 GIMAP2Q9UG22 337 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 FETUBQ9UGM5 382 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 MRTO4Q9UKD2 239 aaKnown RBP6.6□□□□□ -1.35
SPG11-213ENST00000558988 PACSIN3Q9UKS6 424 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 EDARQ9UNE0 448 aa6.6□□□□□ -1.35
SPG11-213ENST00000558988 C19orf53Q9UNZ5 99 aaPredicted RBP6.6□□□□□ -1.35
SPG11-213ENST00000558988 ABCA4P78363 2273 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 A0A087WV62 115 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 A0A1W2PNV4 684 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 SLC28A1O00337 649 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 AZIN1O14977 448 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 SPAG7O75391 227 aa6.59□□□□□ -1.35
SPG11-213ENST00000558988 SKAP2O75563 359 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms