RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PRSS23O95084 383 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 LDLRP01130 860 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 HTR2AP28223 471 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 OR2T5Q6IEZ7 315 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 HMBOX1Q6NT76 420 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 AMIGO2Q86SJ2 522 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 ZNF605Q86T29 641 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 CYP4Z1Q86W10 505 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 TMCO5AQ8N6Q1 288 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 MDS2Q8NDY4 140 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 TOR1AIP2Q8NFQ8 470 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 OR2T29Q8NH02 315 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 OR5W2Q8NH69 310 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 B4GALNT2Q8NHY0 566 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 ZNF559Q9BR84 538 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 HHATLQ9HCP6 504 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 C6orf203Q9P0P8 240 aaPredicted RBP16.49■□□□□ 0.23
CLPX-203ENST00000558958 PPP4R1LQ9P1A2 415 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 RIMS3Q9UJD0 308 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 NTNG1Q9Y2I2 539 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 PCDHGA9Q9Y5G4 932 aaKnown RBP16.49■□□□□ 0.23
CLPX-203ENST00000558958 PTPRQQ9UMZ3 2332 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 B4DXG7 233 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 SNX4O95219 450 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 LINGO3P0C6S8 592 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 RYKP34925 604 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 SLC6A8P48029 635 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 P2RX1P51575 399 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 CCR4P51679 360 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 ARG2P78540 354 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 PIN1Q13526 163 aaPredicted RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 COL28A1Q2UY09 1125 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 ENTPD8Q5MY95 495 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 FBXW10Q5XX13 1052 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 OR5M10Q6IEU7 315 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 CENPNQ96H22 339 aaPredicted RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 PRRC1Q96M27 445 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 KLHDC3Q9BQ90 382 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 POLR2J2Q9GZM3 115 aaKnown RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 POLR2J3Q9H1A7 115 aaKnown RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 NTN4Q9HB63 628 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 HRH3Q9Y5N1 445 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 CPSF4LA6NMK7 179 aaKnown RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 G3V3Y1 287 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 FAAHO00519 579 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 TRIM3O75382 744 aaPredicted RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 CNR1P21554 472 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 MSX1P28360 303 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 SUMO3P55854 103 aaPredicted RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 GANABQ14697 944 aaKnown RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 OR1Q1Q15612 314 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 INPP5JQ15735 1006 aaPredicted RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 TBR1Q16650 682 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 PLEKHM3Q6ZWE6 761 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 PACS2Q86VP3 889 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 LSMEM1Q8N8F7 131 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 WDSUB1Q8N9V3 476 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 KDF1Q8NAX2 398 aaPredicted RBP16.48■□□□□ 0.23
CLPX-203ENST00000558958 ADAMTS16Q8TE57 1224 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 NR4A3Q92570 626 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 TMEM41AQ96HV5 264 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 BDH2Q9BUT1 245 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 TRIM2Q9C040 744 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 SEMA6AQ9H2E6 1030 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 CTPS2Q9NRF8 586 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 DEPPQ9NTK1 212 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 MED11Q9P086 117 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 TESMINQ9Y4I5 508 aa16.48■□□□□ 0.23
CLPX-203ENST00000558958 HEATR5AQ86XA9 2040 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 A0A0G2JMM0 328 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 A0A1W2PPB8 328 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 A0A1W2PRS3 328 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 KIR3DP1A8MWS1 328 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 GNGT2O14610 69 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 SNPHO15079 494 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 ADAMDEC1O15204 470 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 GMFGO60234 142 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 OR5F1O95221 314 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 RRM2P31350 389 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 TNFSF10P50591 281 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 TAS2R41P59536 307 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 CXADRP78310 365 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 SLC34A1Q06495 639 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 CBFBQ13951 182 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 FADS6Q8N9I5 356 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 PIK3C3Q8NEB9 887 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 GPR119Q8TDV5 335 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 ZNF524Q96C55 264 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 DHRS1Q96LJ7 313 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 FNDC11Q9BVV2 318 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.47■□□□□ 0.235e-8■□□□□ 8.8
CLPX-203ENST00000558958 NMNAT1Q9HAN9 279 aaPredicted RBP16.47■□□□□ 0.23
CLPX-203ENST00000558958 TMEM27Q9HBJ8 222 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 ACER3Q9NUN7 267 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 VNN3Q9NY84 501 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 RHCGQ9UBD6 479 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 PRDM4Q9UKN5 801 aa16.47■□□□□ 0.23
CLPX-203ENST00000558958 EML6Q6ZMW3 1958 aa16.46■□□□□ 0.23
CLPX-203ENST00000558958 TRAPPC13A5PLN9 417 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms