RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 QRSL1Q9H0R6 528 aaKnown RBP11.23□□□□□ -0.61
SMAD3-208ENST00000558827 ACBD3Q9H3P7 528 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 PIGMQ9H3S5 423 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 AIG1Q9NVV5 245 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 C6orf203Q9P0P8 240 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-208ENST00000558827 FOXD3Q9UJU5 478 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-208ENST00000558827 DTNAQ9Y4J8 743 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 CELSR1Q9NYQ6 3014 aa11.23□□□□□ -0.61
SMAD3-208ENST00000558827 IGHV3-15A0A0B4J1V0 119 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 A0A1W2PNR3 127 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 PRAMEF27A3QJZ7 478 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 SH3D21A4FU49 640 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 SERINC4A6NH21 518 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 E9PBE3 544 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 NPIPB9F8W1W9 429 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 H3BNH8 94 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 LINC01387J3KSC0 135 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF195O14628 629 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 HDAC3O15379 428 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 SYNGR4O95473 234 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 PLGP00747 810 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ROS1P08922 2347 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 UBTFL6P0CB48 400 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-208ENST00000558827 LCN1P31025 176 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 P2RX1P51575 399 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 CLNS1AP54105 237 aaKnown RBP11.22□□□□□ -0.61
SMAD3-208ENST00000558827 CARD18P57730 90 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 RAC1P63000 192 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ITPR3Q14573 2671 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 GPAT3Q53EU6 434 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ATG16L1Q676U5 607 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ALKBH2Q6NS38 261 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 BHLHB9Q6PI77 547 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 DNAJC14Q6Y2X3 702 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-208ENST00000558827 MAVSQ7Z434 540 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 RNF130Q86XS8 419 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 MISPQ8IVT2 679 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF527Q8NB42 609 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 VPS37AQ8NEZ2 397 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ACTRT2Q8TDY3 377 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF75CPQ92670 426 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ZBTB8AQ96BR9 441 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ADGRG7Q96K78 797 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 WFIKKN1Q96NZ8 548 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 OR52B2Q96RD2 323 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 OR52E6Q96RD3 313 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 THUMPD3Q9BV44 507 aaKnown RBP11.22□□□□□ -0.61
SMAD3-208ENST00000558827 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 KLHL4Q9C0H6 718 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 HOXD1Q9GZZ0 328 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 C12orf49Q9H741 205 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 RNF122Q9H9V4 155 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ICAM5Q9UMF0 924 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 PROCRQ9UNN8 238 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF175Q9Y473 711 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 GPR45Q9Y5Y3 372 aa11.22□□□□□ -0.61
SMAD3-208ENST00000558827 CCDC154A6NI56 674 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 CLDN24A6NM45 220 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 MSTNO14793 375 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 CASKO14936 926 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF264O43296 627 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 DIAPH2O60879 1101 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 STX11O75558 287 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 UGT2B17O75795 530 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 CGAP01215 116 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 UBL4AP11441 157 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 POU2F1P14859 743 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF17P17021 662 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 KLK2P20151 261 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 ME2P23368 584 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 RYKP34925 604 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 CD79BP40259 229 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 CTBP2P56545 445 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 OCRLQ01968 901 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 CHRNEQ04844 493 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 FUT5Q11128 374 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 DAZAP2Q15038 168 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-208ENST00000558827 QPRTQ15274 297 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 ARHGAP11BQ3KRB8 267 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 COX20Q5RI15 118 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 SAXO2Q658L1 398 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 C22orf34Q6ZV56 151 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 SPATA19Q7Z5L4 167 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 MTERF4Q7Z6M4 381 aaKnown RBP11.21□□□□□ -0.61
SMAD3-208ENST00000558827 ANKFN1Q8N957 763 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 TESCQ96BS2 214 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 ZNF775Q96BV0 537 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-208ENST00000558827 ROPN1LQ96C74 230 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 KLHL15Q96M94 604 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 PANX1Q96RD7 426 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 ZBTB18Q99592 522 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 EXD2Q9NVH0 621 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 STOML1Q9UBI4 398 aa11.21□□□□□ -0.61
SMAD3-208ENST00000558827 MCTS1Q9ULC4 181 aaKnown RBP11.21□□□□□ -0.61
SMAD3-208ENST00000558827 FREM1Q5H8C1 2179 aa11.21□□□□□ -0.62
SMAD3-208ENST00000558827 A0A1W2PPR1 153 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 FAM221AA4D161 298 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 DUXAA6NLW8 204 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 TRPC5OSA6NMA1 111 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms