RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PABPC4LP0CB38 370 aaKnown RBP13.87□□□□□ -0.19
TPM1-211ENST00000558314 CREB1P16220 341 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 PPP3CBP16298 524 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 ARRB2P32121 409 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 EIF1P41567 113 aaKnown RBP13.87□□□□□ -0.19
TPM1-211ENST00000558314 PCYT1AP49585 367 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 P2RX1P51575 399 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 VSNL1P62760 191 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 MLC1Q15049 377 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 GPR68Q15743 365 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 PDCD2Q16342 344 aaPredicted RBP13.87□□□□□ -0.19
TPM1-211ENST00000558314 ZNF239Q16600 458 aaKnown RBP13.87□□□□□ -0.19
TPM1-211ENST00000558314 KRTAP21-3Q3LHN1 58 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 XKR7Q5GH72 579 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.87□□□□□ -0.19
TPM1-211ENST00000558314 OLIG3Q7RTU3 272 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 NUFIP2Q7Z417 695 aaKnown RBP13.87□□□□□ -0.19
TPM1-211ENST00000558314 TUSC5Q8IXB3 177 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 RIBC1Q8N443 379 aaPredicted RBP13.87□□□□□ -0.19
TPM1-211ENST00000558314 CAVIN3Q969G5 261 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 MARK4Q96L34 752 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 OR7D2Q96RA2 312 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 PIP5K1AQ99755 562 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 TACO1Q9BSH4 297 aaKnown RBP13.87□□□□□ -0.19
TPM1-211ENST00000558314 DUSP26Q9BV47 211 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 HOXD1Q9GZZ0 328 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 GLRX2Q9NS18 164 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 ARID1AO14497 2285 aa13.87□□□□□ -0.19
TPM1-211ENST00000558314 A0A1W2PNR3 127 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 GJE1A6NN92 205 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 C9JVG2 144 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 CLOCKO15516 846 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 KLF4O43474 513 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 LY6G6DO95868 133 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 G6PDP11413 515 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 IL32P24001 234 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 LOXP28300 417 aaPredicted RBP13.86□□□□□ -0.19
TPM1-211ENST00000558314 PCSK6P29122 969 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 SLC7A1P30825 629 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 PTH2RP49190 550 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 ATP12AP54707 1039 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 KLHL26Q53HC5 615 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 PDZK1Q5T2W1 519 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 FCRLAQ7L513 359 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 MTERF4Q7Z6M4 381 aaKnown RBP13.86□□□□□ -0.19
TPM1-211ENST00000558314 NUDCD3Q8IVD9 361 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 CLECL1Q8IZS7 167 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 LRRC75A-AS1Q8N1F1 130 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 TMEM171Q8WVE6 324 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.86□□□□□ -0.19
TPM1-211ENST00000558314 S100PBPQ96BU1 408 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 ZNF775Q96BV0 537 aaPredicted RBP13.86□□□□□ -0.19
TPM1-211ENST00000558314 GPATCH2Q9NW75 528 aa13.86□□□□□ -0.19
TPM1-211ENST00000558314 EFNA2O43921 213 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 CPSF4O95639 269 aaKnown RBP13.85□□□□□ -0.19
TPM1-211ENST00000558314 BPGMP07738 259 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 PRPS1L1P21108 318 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 MATN1P21941 496 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 NR1H2P55055 460 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 HBA1P69905 142 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 QPRTQ15274 297 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 EXOSC6Q5RKV6 272 aaKnown RBP13.85□□□□□ -0.19
TPM1-211ENST00000558314 OR4F3Q6IEY1 312 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.85□□□□□ -0.19
TPM1-211ENST00000558314 HOMEZQ8IX15 550 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 TOR1AIP2Q8NFQ8 470 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 SFXN5Q8TD22 340 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 GPR119Q8TDV5 335 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 ZFP90Q8TF47 636 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 CPNE4Q96A23 557 aaPredicted RBP13.85□□□□□ -0.19
TPM1-211ENST00000558314 MOAP1Q96BY2 351 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 DNAJA3Q96EY1 480 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 SLC35G5Q96KT7 338 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 BDH2Q9BUT1 245 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 BHLHE41Q9C0J9 482 aaPredicted RBP13.85□□□□□ -0.19
TPM1-211ENST00000558314 QRSL1Q9H0R6 528 aaKnown RBP13.85□□□□□ -0.19
TPM1-211ENST00000558314 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.85□□□□□ -0.19
TPM1-211ENST00000558314 LGALS13Q9UHV8 139 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 ICAM5Q9UMF0 924 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 GPR52Q9Y2T5 361 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 DTNAQ9Y4J8 743 aa13.85□□□□□ -0.19
TPM1-211ENST00000558314 GPC6Q9Y625 555 aaPredicted RBP13.85□□□□□ -0.19
TPM1-211ENST00000558314 V9GYY5 206 aaPredicted RBP13.85□□□□□ -0.19
TPM1-211ENST00000558314 NIPBLQ6KC79 2804 aaeCLIP13.85□□□□□ -0.19
TPM1-211ENST00000558314 VPS13CQ709C8 3753 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 RNF103-CHMP3A0A140T963 221 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 ZNF264O43296 627 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 PRKD3O94806 890 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 ADAP00813 363 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 HEXAP06865 529 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 NUDT17P0C025 328 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 UBL4AP11441 157 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 PRKCAP17252 672 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 ENPP1P22413 925 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 ELK4P28324 431 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 SERPINB5P36952 375 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 ZNF844Q08AG5 666 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 MAD2L1Q13257 205 aaPredicted RBP13.84□□□□□ -0.19
TPM1-211ENST00000558314 RNPS1Q15287 305 aaKnown RBP13.84□□□□□ -0.19
TPM1-211ENST00000558314 STK11Q15831 433 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms