RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 GALNT9Q9HCQ5 603 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 TIGARQ9NQ88 270 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 TMEM45AQ9NWC5 275 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 ZIM2Q9NZV7 527 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 BTNL2Q9UIR0 455 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 RAB26Q9ULW5 256 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 LIPT1Q9Y234 373 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 CARD8Q9Y2G2 431 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 AP4B1Q9Y6B7 739 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 HIVEP3Q5T1R4 2406 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 IGLV3-32A0A0A0MS00 114 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 FADS1O60427 444 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 STX11O75558 287 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 SLC22A3O75751 556 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 KCNK2O95069 426 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 CLDN1O95832 211 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 NUDT14O95848 222 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 IL18BPO95998 194 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 CRHP06850 196 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 CELA3AP09093 270 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 GLI4P10075 376 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 KITP10721 976 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 BMP7P18075 431 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 MATN1P21941 496 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 DCTP40126 519 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 WDR4P57081 412 aaKnown RBP7.87□□□□□ -1.15
USP3-208ENST00000558285 SF3A3Q12874 501 aaKnown RBP eCLIP7.87□□□□□ -1.151e-7■■■■□ 19.8
USP3-208ENST00000558285 MPP2Q14168 576 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 SPCS2Q15005 226 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 ZSWIM7Q19AV6 140 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 FAM174BQ3ZCQ3 159 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 MMEL1Q495T6 779 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 ACSF3Q4G176 576 aaPredicted RBP7.87□□□□□ -1.15
USP3-208ENST00000558285 FLYWCH1Q4VC44 716 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 ZNF385BQ569K4 471 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 DCST2Q5T1A1 773 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 GTF2IRD2BQ6EKJ0 949 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 SLC2A7Q6PXP3 512 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 FGD2Q7Z6J4 655 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 ARPINQ7Z6K5 226 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 YRDCQ86U90 279 aaKnown RBP7.87□□□□□ -1.15
USP3-208ENST00000558285 GTF2IRD2Q86UP8 949 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 GRAMD2AQ8IUY3 354 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 MIER2Q8N344 545 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 KRTCAP2Q8N6L1 136 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 WDSUB1Q8N9V3 476 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 ICA1LQ8NDH6 482 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 TOR1AIP2Q8NFQ8 470 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 DUSP19Q8WTR2 217 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 TMEM234Q8WY98 164 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 PIK3R3Q92569 461 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 ZNF75CPQ92670 426 aaPredicted RBP7.87□□□□□ -1.15
USP3-208ENST00000558285 PMM1Q92871 262 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 REXO5Q96IC2 774 aaKnown RBP7.87□□□□□ -1.15
USP3-208ENST00000558285 ITCHQ96J02 903 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 DMRTB1Q96MA1 342 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 OR52E6Q96RD3 313 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 CITED4Q96RK1 184 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 TRIB1Q96RU8 372 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 UGT2B28Q9BY64 529 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 PIGMQ9H3S5 423 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 DSN1Q9H410 356 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 ANKRA2Q9H9E1 313 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 PNPOQ9NVS9 261 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 AIG1Q9NVV5 245 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 TAS2R1Q9NYW7 299 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 CALML5Q9NZT1 146 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 SPRR3Q9UBC9 169 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 MARCOQ9UEW3 520 aaPredicted RBP7.87□□□□□ -1.15
USP3-208ENST00000558285 RNF6Q9Y252 685 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 LIPGQ9Y5X9 500 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 PTPN13Q12923 2485 aa7.87□□□□□ -1.15
USP3-208ENST00000558285 FAM90A27PA6NNH2 459 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 CPSF4O95639 269 aaKnown RBP7.86□□□□□ -1.15
USP3-208ENST00000558285 TFAP2AP05549 437 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 PGRP06401 933 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 GUSBP08236 651 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 GSTT2P0CG29 244 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 GSTT2BP0CG30 244 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 FKBP2P26885 142 aaKnown RBP7.86□□□□□ -1.15
USP3-208ENST00000558285 ASCL1P50553 236 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 ATP12AP54707 1039 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 HBA1P69905 142 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 SGCBQ16585 318 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 DUSP5Q16690 384 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 EIPR1Q53HC9 387 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 CES4AQ5XG92 561 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 OR4F3Q6IEY1 312 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 FIGNL1Q6PIW4 674 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 C6orf120Q7Z4R8 191 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 WDR53Q7Z5U6 358 aaPredicted RBP7.86□□□□□ -1.15
USP3-208ENST00000558285 MTDHQ86UE4 582 aaKnown RBP7.86□□□□□ -1.15
USP3-208ENST00000558285 CHERPQ8IWX8 916 aaKnown RBP7.86□□□□□ -1.15
USP3-208ENST00000558285 FADS6Q8N9I5 356 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 SLC16A11Q8NCK7 471 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 SIMC1Q8NDZ2 872 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 OR2M3Q8NG83 312 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 OR4N2Q8NGD1 307 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 PHOSPHO1Q8TCT1 267 aa7.86□□□□□ -1.15
USP3-208ENST00000558285 RNF138Q8WVD3 245 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms