RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ZNF311Q5JNZ3 666 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 MRPL2Q5T653 305 aaKnown RBP23.15■■□□□ 1.3
SMAD6-202ENST00000557916 C8orf82Q6P1X6 216 aaPredicted RBP23.15■■□□□ 1.3
SMAD6-202ENST00000557916 AAGABQ6PD74 315 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 ZNF836Q6ZNA1 936 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 CD163Q86VB7 1156 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 SLC30A8Q8IWU4 369 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 SLC15A3Q8IY34 581 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 OR5M9Q8NGP3 310 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 GPR119Q8TDV5 335 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 CNOT9Q92600 299 aaKnown RBP23.15■■□□□ 1.3
SMAD6-202ENST00000557916 ARSGQ96EG1 525 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 ZNF583Q96ND8 569 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 ZNF607Q96SK3 696 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 TIMP4Q99727 224 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 CMTM6Q9NX76 183 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 TINAGQ9UJW2 476 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 AP3M1Q9Y2T2 418 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 GPC6Q9Y625 555 aaPredicted RBP23.15■■□□□ 1.3
SMAD6-202ENST00000557916 PCNX3Q9H6A9 2034 aa23.14■■□□□ 1.3
SMAD6-202ENST00000557916 PABPC4LP0CB38 370 aaKnown RBP23.14■■□□□ 1.29
SMAD6-202ENST00000557916 PCGF2P35227 344 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 PLAURQ03405 335 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 PLPPR5Q32ZL2 321 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 WLSQ5T9L3 541 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 C1QL3Q5VWW1 255 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 DOLPP1Q86YN1 238 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 OR5M1Q8NGP8 315 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 ZBTB8AQ96BR9 441 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 REXO5Q96IC2 774 aaKnown RBP23.14■■□□□ 1.29
SMAD6-202ENST00000557916 PIGQQ9BRB3 760 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 SPATA5L1Q9BVQ7 753 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 EXOSC3Q9NQT5 275 aaKnown RBP23.14■■□□□ 1.29
SMAD6-202ENST00000557916 RLIMQ9NVW2 624 aa23.14■■□□□ 1.29
SMAD6-202ENST00000557916 DNAJB12Q9NXW2 375 aaKnown RBP23.14■■□□□ 1.29
SMAD6-202ENST00000557916 HELZ2Q9BYK8 2649 aaKnown RBP23.14■■□□□ 1.29
SMAD6-202ENST00000557916 CCT8L1PA6NM43 557 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 SHISA8B8ZZ34 492 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 LINGO3P0C6S8 592 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 CHMP24386 653 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 CA7P43166 264 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 SLC7A2P52569 658 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 PSME3P61289 254 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 EEF1A1P68104 462 aaKnown RBP23.13■■□□□ 1.29
SMAD6-202ENST00000557916 KCNC4Q03721 635 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 TOMM34Q15785 309 aaPredicted RBP23.13■■□□□ 1.29
SMAD6-202ENST00000557916 ZSWIM7Q19AV6 140 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 EMC4Q5J8M3 183 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 RNF220Q5VTB9 566 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 ARMC7Q9H6L4 198 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 PNPLA3Q9NST1 481 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 USP22Q9UPT9 525 aa23.13■■□□□ 1.29
SMAD6-202ENST00000557916 RELNP78509 3460 aa23.12■■□□□ 1.29
SMAD6-202ENST00000557916 GTF3C1Q12789 2109 aa23.12■■□□□ 1.29
SMAD6-202ENST00000557916 OR2M5A3KFT3 312 aa23.12■■□□□ 1.29
SMAD6-202ENST00000557916 CDHR4A6H8M9 788 aa23.12■■□□□ 1.29
SMAD6-202ENST00000557916 SERPINB7O75635 380 aa23.12■■□□□ 1.29
SMAD6-202ENST00000557916 ESRRAP11474 423 aaPredicted RBP23.12■■□□□ 1.29
SMAD6-202ENST00000557916 PCBP3P57721 371 aaKnown RBP23.12■■□□□ 1.29
SMAD6-202ENST00000557916 TMEM44Q2T9K0 475 aa23.12■■□□□ 1.29
SMAD6-202ENST00000557916 DCST1Q5T197 706 aa23.12■■□□□ 1.29
SMAD6-202ENST00000557916 ERICH5Q6P6B1 374 aa23.12■■□□□ 1.29
SMAD6-202ENST00000557916 ENPP6Q6UWR7 440 aa23.12■■□□□ 1.29
SMAD6-202ENST00000557916 NSL1Q96IY1 281 aa23.12■■□□□ 1.29
SMAD6-202ENST00000557916 FAM220BPB1ANY3 271 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 LINC01387J3KSC0 135 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 LRRTM2O43300 516 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 DNAJA2O60884 412 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 ZNF17P17021 662 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 PGCP20142 388 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 RYKP34925 604 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 STARP49675 285 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 MNAT1P51948 309 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 QPRTQ15274 297 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 INTS11Q5TA45 600 aaKnown RBP23.11■■□□□ 1.29
SMAD6-202ENST00000557916 ZNF585AQ6P3V2 769 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 CLIP4Q8N3C7 705 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 GTPBP8Q8N3Z3 284 aaPredicted RBP23.11■■□□□ 1.29
SMAD6-202ENST00000557916 OR2T12Q8NG77 320 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 NPAS1Q99742 590 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 ALKBH4Q9NXW9 302 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 ZNF337Q9Y3M9 751 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 CHST2Q9Y4C5 530 aa23.11■■□□□ 1.29
SMAD6-202ENST00000557916 A0A1B0GUH1 482 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 C7orf72A4D263 438 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 PRORSD1PA6NEY8 169 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 NME4O00746 187 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 GCM2O75603 506 aaPredicted RBP23.1■■□□□ 1.29
SMAD6-202ENST00000557916 PRKAR1BP31321 381 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 EIF1P41567 113 aaKnown RBP23.1■■□□□ 1.29
SMAD6-202ENST00000557916 SLC6A8P48029 635 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 LIPEQ05469 1076 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 C4orf17Q53FE4 359 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 PATL1Q86TB9 770 aaKnown RBP23.1■■□□□ 1.29
SMAD6-202ENST00000557916 ARMC8Q8IUR7 673 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 GRAMD2AQ8IUY3 354 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 POC1BQ8TC44 478 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 RELTQ969Z4 430 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 ZNF524Q96C55 264 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 WDYHV1Q96HA8 205 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms