RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, human

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH11-211	ENST00000557726	ATP6V1H	Q9UI12	483 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	CARD8	Q9Y2G2	431 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	RNF115	Q9Y4L5	304 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	TMEM233	B4DJY2	109 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	PIP5K1B	O14986	540 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	SCAMP2	O15127	329 aa	Known RBP	11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	PRKD3	O94806	890 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	NTN1	O95631	604 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	CD3E	P07766	207 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	KRT16	P08779	473 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	LAMP1	P11279	417 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	ZNF844	Q08AG5	666 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	MLC1	Q15049	377 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	DCST2	Q5T1A1	773 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	CDC73	Q6P1J9	531 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	CBLN3	Q6UW01	205 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	TFAP2E	Q6VUC0	442 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	NUFIP2	Q7Z417	695 aa	Known RBP	11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	ZNF619	Q8N2I2	560 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	TMCO5A	Q8N6Q1	288 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	OR56A1	Q8NGH5	318 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	RFWD2	Q8NHY2	731 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	AGR3	Q8TD06	166 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	IGFBPL1	Q8WX77	278 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	GTPBP3	Q969Y2	492 aa	Known RBP	11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	TRMT61A	Q96FX7	289 aa	Known RBP	11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	PPP3R2	Q96LZ3	170 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	TMEM204	Q9BSN7	226 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	ACTRT3	Q9BYD9	372 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	EML4	Q9HC35	981 aa	Known RBP	11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	ATAD3A	Q9NVI7	634 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	KLHL13	Q9P2N7	655 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	GIMAP2	Q9UG22	337 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	TRAF6	Q9Y4K3	522 aa		11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	GPC6	Q9Y625	555 aa	Predicted RBP	11.38	□□□□□ -0.59
RDH11-211	ENST00000557726	CHD3	Q12873	2000 aa	Known RBP	11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	TLDC2	A0PJX2	215 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	CFLAR	O15519	480 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	OIP5	O43482	229 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	PEX11A	O75192	247 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	GCM2	O75603	506 aa	Predicted RBP	11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	SOX30	O94993	753 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	ADA	P00813	363 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	CHRNG	P07510	517 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	NID1	P14543	1247 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	ADH6	P28332	368 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	SLC7A1	P30825	629 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	ALDH3A1	P30838	453 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	CCR4	P51679	360 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	ATP12A	P54707	1039 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	SUMO3	P55854	103 aa	Predicted RBP	11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	TNK1	Q13470	666 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	VEZF1	Q14119	521 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	LSM12	Q3MHD2	195 aa	Known RBP	11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	ATP6AP1L	Q52LC2	224 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	KLHL26	Q53HC5	615 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	ARL13A	Q5H913	290 aa	Predicted RBP	11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	EXOSC6	Q5RKV6	272 aa	Known RBP	11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	SFRP5	Q5T4F7	317 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	GABRG1	Q8N1C3	465 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	BANP	Q8N9N5	519 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	GPR119	Q8TDV5	335 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	ZFP90	Q8TF47	636 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	OR5P2	Q8WZ92	322 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	HSD17B8	Q92506	261 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	KISS1R	Q969F8	398 aa	Predicted RBP	11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	FBXW5	Q969U6	566 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	ARL8A	Q96BM9	186 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	PRPF18	Q99633	342 aa	Known RBP	11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	C1orf50	Q9BV19	199 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	ESRP2	Q9H6T0	727 aa	Known RBP	11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	CXorf36	Q9H7Y0	433 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	ACTL7B	Q9Y614	415 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726	CAD	P27708	2225 aa		11.37	□□□□□ -0.59
RDH11-211	ENST00000557726		A0A1W2PP18	115 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	EFNA2	O43921	213 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	NPHS1	O60500	1241 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	CYP7B1	O75881	506 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	SLU7	O95391	586 aa	Known RBP	11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	C6orf47	O95873	294 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	FES	P07332	822 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	YES1	P07947	543 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	FGF4	P08620	206 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	PRKCA	P17252	672 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	SOAT1	P35610	550 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	SELENBP1	Q13228	472 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	P2RY6	Q15077	328 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	TAB1	Q15750	504 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	TOMM34	Q15785	309 aa	Predicted RBP	11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	CLEC12B	Q2HXU8	276 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	NDUFAF6	Q330K2	333 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	NCMAP	Q5T1S8	102 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	ADAM5	Q6NVV9	412 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	SLC43A2	Q8N370	569 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	NATD1	Q8N6N6	113 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	FNDC5	Q8NAU1	212 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	TOR1AIP2	Q8NFQ8	470 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	APOPT1	Q96IL0	206 aa		11.36	□□□□□ -0.59
RDH11-211	ENST00000557726	MRGPRX4	Q96LA9	322 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms