RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CXXC5Q7LFL8 322 aaKnown RBP14.17□□□□□ -0.14
SCFD1-224ENST00000557713 R3HCC1LQ7Z5L2 792 aaKnown RBP14.17□□□□□ -0.14
SCFD1-224ENST00000557713 TDRPQ86YL5 185 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 SPATA3Q8NHX4 192 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 PSMA8Q8TAA3 256 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 GPR119Q8TDV5 335 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 NEUROG1Q92886 237 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 FBXW5Q969U6 566 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 ZNF524Q96C55 264 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 TRMOQ9BU70 441 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 HOXD1Q9GZZ0 328 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 ESRP2Q9H6T0 727 aaKnown RBP14.17□□□□□ -0.14
SCFD1-224ENST00000557713 COQ10BQ9H8M1 238 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 NGBQ9NPG2 151 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 CARD8Q9Y2G2 431 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 SNX8Q9Y5X2 465 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 GPC6Q9Y625 555 aaPredicted RBP14.17□□□□□ -0.14
SCFD1-224ENST00000557713 USF3Q68DE3 2245 aa14.17□□□□□ -0.14
SCFD1-224ENST00000557713 NPIPA5A0A0B4J1W7 369 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 GJE1A6NN92 205 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 RNF223E7ERA6 249 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 NPIPA7E9PJI5 369 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 NPIPB9F8W1W9 429 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 CLOCKO15516 846 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 TRIM13O60858 407 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 CHEK2O96017 543 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 ADAP00813 363 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 CD3EP07766 207 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 THBS1P07996 1170 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 NPIPA8P0DM63 369 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 LAMP1P11279 417 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 KRT4P19013 534 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 ENPP1P22413 925 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 IL32P24001 234 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 IDUAP35475 653 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 RNF144AP50876 292 aaPredicted RBP14.16□□□□□ -0.14
SCFD1-224ENST00000557713 PCLAFQ15004 111 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 ETFDHQ16134 617 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.16□□□□□ -0.14
SCFD1-224ENST00000557713 HEPHL1Q6MZM0 1159 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 ATG4DQ86TL0 474 aaPredicted RBP14.16□□□□□ -0.14
SCFD1-224ENST00000557713 OR7A2PQ8NGA2 310 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 PIWIL2Q8TC59 973 aaKnown RBP14.16□□□□□ -0.14
SCFD1-224ENST00000557713 SMAP2Q8WU79 429 aaPredicted RBP14.16□□□□□ -0.14
SCFD1-224ENST00000557713 TRMT61AQ96FX7 289 aaKnown RBP14.16□□□□□ -0.14
SCFD1-224ENST00000557713 USB1Q9BQ65 265 aaKnown RBP14.16□□□□□ -0.14
SCFD1-224ENST00000557713 RHOXF2Q9BQY4 288 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 ACTRT3Q9BYD9 372 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 GPATCH2Q9NW75 528 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 ING1Q9UK53 422 aaPredicted RBP14.16□□□□□ -0.14
SCFD1-224ENST00000557713 TRAF6Q9Y4K3 522 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 KCNE3Q9Y6H6 103 aa14.16□□□□□ -0.14
SCFD1-224ENST00000557713 PRR14LQ5THK1 2151 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 DPRXA6NFQ7 191 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 TMEM233B4DJY2 109 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 KIF2AO00139 706 aaPredicted RBP14.15□□□□□ -0.14
SCFD1-224ENST00000557713 SCAMP2O15127 329 aaKnown RBP14.15□□□□□ -0.14
SCFD1-224ENST00000557713 NUDT14O95848 222 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 PRKCAP17252 672 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 DDX5P17844 614 aaKnown RBP14.15□□□□□ -0.14
SCFD1-224ENST00000557713 ATP6V1C1P21283 382 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 CDKN1AP38936 164 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 CCT3P49368 545 aaKnown RBP14.15□□□□□ -0.14
SCFD1-224ENST00000557713 ATP12AP54707 1039 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 SUMO3P55854 103 aaPredicted RBP14.15□□□□□ -0.14
SCFD1-224ENST00000557713 ITGADQ13349 1161 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 ZNF672Q499Z4 452 aaPredicted RBP14.15□□□□□ -0.14
SCFD1-224ENST00000557713 SLC25A53Q5H9E4 307 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 DCST2Q5T1A1 773 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 DNM1P46Q6ZS02 220 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 HOMEZQ8IX15 550 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 GSPT2Q8IYD1 628 aaKnown RBP14.15□□□□□ -0.14
SCFD1-224ENST00000557713 ZNF619Q8N2I2 560 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 SLC43A2Q8N370 569 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 BANPQ8N9N5 519 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 ZNF527Q8NB42 609 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 MAPK1IP1LQ8NDC0 245 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 ADAMTS15Q8TE58 950 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 ZFP90Q8TF47 636 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 TWIST2Q8WVJ9 160 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 OR5P2Q8WZ92 322 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 KISS1RQ969F8 398 aaPredicted RBP14.15□□□□□ -0.14
SCFD1-224ENST00000557713 CHMP6Q96FZ7 201 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 REG4Q9BYZ8 158 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 CXorf36Q9H7Y0 433 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 ANKZF1Q9H8Y5 726 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 BCO1Q9HAY6 547 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 GIMAP2Q9UG22 337 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 LIPT1Q9Y234 373 aa14.15□□□□□ -0.14
SCFD1-224ENST00000557713 MAGED1Q9Y5V3 778 aaPredicted RBP14.15□□□□□ -0.14
SCFD1-224ENST00000557713 ESPNB1AK53 854 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 TMEM114B3SHH9 223 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 H3BNH8 94 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 GTPBP1O00178 669 aaKnown RBP14.14□□□□□ -0.15
SCFD1-224ENST00000557713 ETV2O00321 342 aaPredicted RBP14.14□□□□□ -0.15
SCFD1-224ENST00000557713 PIP5K1BO14986 540 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 CHRNGP07510 517 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 HPCAL1P37235 193 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 RPL3P39023 403 aaKnown RBP14.14□□□□□ -0.15
SCFD1-224ENST00000557713 RAC3P60763 192 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms