RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 Q9UFV3 132 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 ICAM5Q9UMF0 924 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 SLC35A3Q9Y2D2 325 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 CARD8Q9Y2G2 431 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF337Q9Y3M9 751 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 PRAMEF27A3QJZ7 478 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 MBD3L4A6NDZ8 208 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 MBD3L3A6NE82 208 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 MBD3L5A6NJ08 208 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 CLCA1A8K7I4 914 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 TNFRSF21O75509 655 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 CSTAP01040 98 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 C1QCP02747 245 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 CAPN3P20807 821 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 ADH6P28332 368 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 CEACAM8P31997 349 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 MVDP53602 400 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 RPS3AP61247 264 aaKnown RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 CHRNEQ04844 493 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 CBFBQ13951 182 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 SYPL1Q16563 259 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 GTDC1Q4AE62 458 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 SP5Q6BEB4 398 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 CBLN3Q6UW01 205 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 SEM1Q6ZVN7 128 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 MED12LQ86YW9 2145 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 CCDC71Q8IV32 467 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 ANKFN1Q8N957 763 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 OR5M1Q8NGP8 315 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 OR5W2Q8NH69 310 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 MBD3L2Q8NHZ7 208 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 ARSGQ96EG1 525 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 ZFP3Q96NJ6 502 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 TM9SF2Q99805 663 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF385DQ9H6B1 395 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 RUBCNLQ9H714 662 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 MTHFD2LQ9H903 347 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 KCNJ16Q9NPI9 418 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 SLC52A3Q9NQ40 469 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 KCNE5Q9UJ90 142 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 LEF1Q9UJU2 399 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 CORO2BQ9UQ03 480 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 NDUFAF1Q9Y375 327 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 L3MBTL1Q9Y468 752 aa11.28□□□□□ -0.6
SLIRP-211ENST00000557623 GPC6Q9Y625 555 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-211ENST00000557623 SPTBN1Q01082 2364 aaKnown RBP11.27□□□□□ -0.6
SLIRP-211ENST00000557623 PTPN13Q12923 2485 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 DVL2O14641 736 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 ANGPT2O15123 496 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 CHRM4P08173 479 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 LINGO3P0C6S8 592 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 ETFAP13804 333 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 HOXB9P17482 250 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-211ENST00000557623 ME2P23368 584 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 ELK4P28324 431 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 RNF144AP50876 292 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-211ENST00000557623 CRISP3P54108 245 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 RAC1P63000 192 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 KCNJ10P78508 379 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 RGNQ15493 299 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 CDSNQ15517 529 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 SLC25A35Q3KQZ1 300 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 PAGE3Q5JUK9 113 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 OLIG3Q7RTU3 272 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 ADGRE4PQ86SQ3 457 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 GRAMD2AQ8IUY3 354 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 CMIPQ8IY22 773 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 PEX5LQ8IYB4 626 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 UBQLNLQ8IYU4 475 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 TNIP2Q8NFZ5 429 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 GPR119Q8TDV5 335 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 TMEM234Q8WY98 164 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 SMPDL3BQ92485 455 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 AURKBQ96GD4 344 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-211ENST00000557623 RNF145Q96MT1 663 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 SLC38A1Q9H2H9 487 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 CACYBPQ9HB71 228 aaKnown RBP11.27□□□□□ -0.61
SLIRP-211ENST00000557623 PAQR5Q9NXK6 330 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-211ENST00000557623 KLHL14Q9P2G3 628 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF629Q9UEG4 869 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-211ENST00000557623 GMEB1Q9Y692 573 aa11.27□□□□□ -0.61
SLIRP-211ENST00000557623 CENPVL1A0A0U1RR11 272 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 AGAP5A6NIR3 686 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 GJE1A6NN92 205 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 FAM90A27PA6NNH2 459 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 EVPLLA8MZ36 301 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 SHISA8B8ZZ34 492 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 SEC14L5O43304 696 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 OIP5O43482 229 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 CYP7B1O75881 506 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 TOXO94900 526 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 RCBTB2O95199 551 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 IL18BPO95998 194 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 BCHEP06276 602 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 DBIP07108 87 aaKnown RBP11.26□□□□□ -0.61
SLIRP-211ENST00000557623 SNRPB2P08579 225 aaKnown RBP11.26□□□□□ -0.61
SLIRP-211ENST00000557623 TFPTP0C1Z6 253 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 UBTFL6P0CB48 400 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-211ENST00000557623 BMP2P12643 396 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms