RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 PARLQ9H300 379 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 HAUS4Q9H6D7 363 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 PARVGQ9HBI0 331 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ZFP14Q9HCL3 533 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 FGF22Q9HCT0 170 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 MEPEQ9NQ76 525 aaPredicted RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 SIGLEC8Q9NYZ4 499 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 THAP10Q9P2Z0 257 aaPredicted RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 PISDQ9UG56 409 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF221Q9UK13 617 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 RARRES3Q9UL19 164 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 BARX2Q9UMQ3 279 aaPredicted RBP2.59□□□□□ -1.99
TRAV28-201ENST00000557548 NPIPA1Q9UND3 350 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 NTNG1Q9Y2I2 539 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 POLDIP2Q9Y2S7 368 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 GMPPBQ9Y5P6 360 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 GMEB1Q9Y692 573 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 COMMD3-BMI1R4GMX3 469 aa2.59□□□□□ -1.99
TRAV28-201ENST00000557548 GRIN2DO15399 1336 aa2.59□□□□□ -2
TRAV28-201ENST00000557548 FRMPD4Q14CM0 1322 aa2.59□□□□□ -2
TRAV28-201ENST00000557548 WIZO95785 1651 aa2.59□□□□□ -2
TRAV28-201ENST00000557548 SCN5AQ14524 2016 aa2.59□□□□□ -2
TRAV28-201ENST00000557548 IGHV4-30-2A0A087WSY4 118 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 HEATR9A2RTY3 570 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 TRABD2BA6NFA1 517 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 ACOD1A6NK06 481 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 OR2AG2A6NM03 316 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 ABCD4O14678 606 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 NVLO15381 856 aaKnown RBP2.58□□□□□ -2
TRAV28-201ENST00000557548 TAPBPO15533 448 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 LRRTM2O43300 516 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 SNAP91O60641 907 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 NDUFB10O96000 172 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 PGK1P00558 417 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 AGTP01019 485 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 IGHG3P01860 377 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 AMBPP02760 352 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 H2BFMP0C1H6 154 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 STAG3L3P0CL85 134 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 PRKACBP22694 351 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 HMGB2P26583 209 aaKnown RBP2.58□□□□□ -2
TRAV28-201ENST00000557548 PTBP1P26599 531 aaKnown RBP eCLIP2.58□□□□□ -2
TRAV28-201ENST00000557548 NF2P35240 595 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 NUP62P37198 522 aaPredicted RBP2.58□□□□□ -2
TRAV28-201ENST00000557548 CAPGP40121 348 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 OR1G1P47890 313 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 EFNB2P52799 333 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 CARD18P57730 90 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 RPL8P62917 257 aaKnown RBP2.58□□□□□ -2
TRAV28-201ENST00000557548 ENPEPQ07075 957 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 CUL1Q13616 776 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 NECTIN1Q15223 517 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 SIX1Q15475 284 aaPredicted RBP2.58□□□□□ -2
TRAV28-201ENST00000557548 MS4A18Q3C1V0 323 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 MOGAT2Q3SYC2 334 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 ZFP69Q49AA0 526 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 MS4A13Q5J8X5 152 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 LINC00242Q5T6M2 205 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 LIPNQ5VXI9 398 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 WSCD1Q658N2 575 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 OR8G2PQ6IF36 304 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 VITQ6UXI7 678 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 STAC2Q6ZMT1 411 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 GCNT7Q6ZNI0 430 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 NOTCH2NLQ7Z3S9 236 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 IFNEQ86WN2 208 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 TGIF2LXQ8IUE1 241 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 KRT222Q8N1A0 295 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 DHRSXQ8N5I4 330 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 ALLCQ8N6M5 410 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 TRIML2Q8N7C3 387 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 ZNF321PQ8N8H1 164 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 Q8N9P0 234 aaPredicted RBP2.58□□□□□ -2
TRAV28-201ENST00000557548 OR2T33Q8NG76 320 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 OR10A7Q8NGE5 316 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 LILRB4Q8NHJ6 448 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 KCNG3Q8TAE7 436 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 FAM76AQ8TAV0 307 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 FNDC8Q8TC99 324 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 ST8SIA1Q92185 356 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 BADQ92934 168 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 C10orf35Q96D05 121 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 ARL5BQ96KC2 179 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 IFT74Q96LB3 600 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 NSMCE3Q96MG7 304 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 CATSPER2Q96P56 530 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 PGLYRP2Q96PD5 576 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 TRIM62Q9BVG3 475 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 PARD6BQ9BYG5 372 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 C8orf33Q9H7E9 229 aaPredicted RBP2.58□□□□□ -2
TRAV28-201ENST00000557548 RCOR3Q9P2K3 495 aaPredicted RBP2.58□□□□□ -2
TRAV28-201ENST00000557548 THEGQ9P2T0 379 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 MLXQ9UH92 298 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 ZNF639Q9UID6 485 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 KIAA1257Q9ULG3 409 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 OARD1Q9Y530 152 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 CPQQ9Y646 472 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 AUP1Q9Y679 476 aa2.58□□□□□ -2
TRAV28-201ENST00000557548 PEG3Q9GZU2 1588 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms