RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 EPPINO95925 133 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 GUSBP08236 651 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 GLI4P10075 376 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 IL7RP16871 459 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 PGCP20142 388 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 HTR1EP28566 365 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 CDKN2CP42773 168 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 SLC6A8P48029 635 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 GFRA1P56159 465 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 NUP107P57740 925 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 ADORA2A-AS1P86434 159 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 FADDQ13158 208 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 LARS2Q15031 903 aaKnown RBP7.54□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF141Q15928 474 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 ZSWIM7Q19AV6 140 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 ACSF3Q4G176 576 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-223ENST00000557511 KLHL26Q53HC5 615 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 EMC4Q5J8M3 183 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.54□□□□□ -1.2
PSEN1-223ENST00000557511 NSUN5P2Q63ZY6 315 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 HEPHL1Q6MZM0 1159 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 SLC2A7Q6PXP3 512 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 APOOLQ6UXV4 268 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 ZAR1Q86SH2 424 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 KRT73Q86Y46 540 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 GRAMD2AQ8IUY3 354 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 OR5W2Q8NH69 310 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 TSPEARQ8WU66 669 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 TMEM234Q8WY98 164 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 GTF2H4Q92759 462 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 NTNG2Q96CW9 530 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 WDYHV1Q96HA8 205 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 REXO5Q96IC2 774 aaKnown RBP7.54□□□□□ -1.2
PSEN1-223ENST00000557511 ZFP3Q96NJ6 502 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF350Q9GZX5 532 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 CCDC134Q9H6E4 229 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 MTHFD2LQ9H903 347 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-223ENST00000557511 CALHM2Q9HA72 323 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 TIGARQ9NQ88 270 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 SERINC1Q9NRX5 453 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 MED17Q9NVC6 651 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 DNAJB12Q9NXW2 375 aaKnown RBP7.54□□□□□ -1.2
PSEN1-223ENST00000557511 KLHL14Q9P2G3 628 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 RNF6Q9Y252 685 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 CARD8Q9Y2G2 431 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 SPIN1Q9Y657 262 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-223ENST00000557511 SVILO95425 2214 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 PRRC2CQ9Y520 2896 aaKnown RBP7.53□□□□□ -1.2
PSEN1-223ENST00000557511 CD8B2A6NJW9 211 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 FAM90A27PA6NNH2 459 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 ADAM10O14672 748 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 ZIC3O60481 467 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 FCMRO60667 390 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 CCDC22O60826 627 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 TNFRSF21O75509 655 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 SYNGR4O95473 234 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 H6PDO95479 791 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 BCHEP06276 602 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 DBIP07108 87 aaKnown RBP7.53□□□□□ -1.2
PSEN1-223ENST00000557511 SNRPB2P08579 225 aaKnown RBP7.53□□□□□ -1.2
PSEN1-223ENST00000557511 UBTFL6P0CB48 400 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-223ENST00000557511 FCGR2AP12318 317 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 ETFAP13804 333 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 COX6B1P14854 86 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 OPRM1P35372 400 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 TIMP3P35625 211 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 STARP49675 285 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF117Q03924 483 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 CHRNEQ04844 493 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 SF3A3Q12874 501 aaKnown RBP eCLIP7.53□□□□□ -1.2
PSEN1-223ENST00000557511 NFYCQ13952 458 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 CD226Q15762 336 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 SYPL1Q16563 259 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 SLC25A35Q3KQZ1 300 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 LIN52Q52LA3 116 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 SP5Q6BEB4 398 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-223ENST00000557511 OR2A2Q6IF42 318 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 LINC00114Q6XXX2 140 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 CPLX4Q7Z7G2 160 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 CCDC71Q8IV32 467 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-223ENST00000557511 MCEMP1Q8IX19 187 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 CMIPQ8IY22 773 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF440Q8IYI8 595 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 GTPBP8Q8N3Z3 284 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-223ENST00000557511 METTL25Q8N6Q8 603 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 WDR60Q8WVS4 1066 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 SH3GL1Q99961 368 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 SPATA5L1Q9BVQ7 753 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 LAT2Q9GZY6 243 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 SERHL2Q9H4I8 314 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 SLC13A4Q9UKG4 626 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 MCTS1Q9ULC4 181 aaKnown RBP7.53□□□□□ -1.2
PSEN1-223ENST00000557511 IFT52Q9Y366 437 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF337Q9Y3M9 751 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 PCDHB14Q9Y5E9 798 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 FAM215AQ9Y5M1 114 aa7.53□□□□□ -1.2
PSEN1-223ENST00000557511 A0A0G2JPF8 293 aa7.52□□□□□ -1.21
PSEN1-223ENST00000557511 C7orf72A4D263 438 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms