RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 PRAF2O60831 178 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 RHOP08100 348 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 H2AFB2P0C5Z0 115 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 PRR23D2P0DMB1 279 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-232ENST00000557487 IFI30P13284 250 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 MYOGP15173 224 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 POLR2CP19387 275 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-232ENST00000557487 RAB3BP20337 219 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 CLCNKAP51800 687 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 METAP1P53582 386 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 STXBP1P61764 594 aaKnown RBP15.14■□□□□ 0.01
SHMT2-232ENST00000557487 DUSP8Q13202 625 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 SNTA1Q13424 505 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 GAS6Q14393 721 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 ARHGAP11BQ3KRB8 267 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 FNDC3BQ53EP0 1204 aaKnown RBP15.14■□□□□ 0.01
SHMT2-232ENST00000557487 LYPD4Q6UWN0 246 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 FRRS1Q6ZNA5 592 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 OR8H3Q8N146 312 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 TMEM99Q8N816 258 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 KISS1RQ969F8 398 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-232ENST00000557487 ZG16BQ96DA0 208 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 NXPE2Q96DL1 559 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 NKX2-4Q9H2Z4 354 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 TTYH1Q9H313 450 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-232ENST00000557487 KLHL31Q9H511 634 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 POLMQ9NP87 494 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-232ENST00000557487 SIDT1Q9NXL6 827 aaKnown RBP15.14■□□□□ 0.01
SHMT2-232ENST00000557487 UBQLN2Q9UHD9 624 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF223Q9UK11 482 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-232ENST00000557487 NPTNQ9Y639 398 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 ANTXRLA6NF34 631 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 C1QTNF3-AMACRE9PGA6 284 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 CDC42EP2O14613 210 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 PPM1DO15297 605 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF749O43361 778 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 PIP5K1CO60331 668 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 PRKRAO75569 313 aaKnown RBP15.13■□□□□ 0.01
SHMT2-232ENST00000557487 CD1AP06126 327 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 ZGLP1P0C6A0 271 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 POU3F3P20264 500 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-232ENST00000557487 TEAD1P28347 426 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 PDX1P52945 283 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 DUSP2Q05923 314 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 GRK1Q15835 563 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 MAPK14Q16539 360 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 GSG1Q2KHT4 349 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 FAM69AQ5T7M9 428 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 DMKNQ6E0U4 476 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-232ENST00000557487 MFSD12Q6NUT3 480 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 ASPGQ86U10 573 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 CDK20Q8IZL9 346 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 OR10H4Q8NGA5 316 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 OR9A2Q8NGT5 310 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 RPLP0P6Q8NHW5 317 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 PHYHIPQ92561 330 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 SLC35A4Q96G79 324 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 MAT2BQ9NZL9 334 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 FAM183AA6NL82 134 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 AGRPO00253 132 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 GPR171O14626 319 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 ARL6IP5O75915 188 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 CA3P07451 260 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 TYRP1P17643 537 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 RAB14P61106 215 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 CAMK2DQ13557 499 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 B3GLCTQ6Y288 498 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 SIAH3Q8IW03 269 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 SLITRK4Q8IW52 837 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 TIGD4Q8IY51 512 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 HSD17B8Q92506 261 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 PMM1Q92871 262 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 C12orf10Q9HB07 376 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 EQTNQ9NQ60 294 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 PRDM9Q9NQV7 894 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 FBXL21Q9UKT6 434 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 SLC35A3Q9Y2D2 325 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 WDR45Q9Y484 360 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 FKBP7Q9Y680 259 aa15.13■□□□□ 0.01
SHMT2-232ENST00000557487 NAP1L6A6NFF2 107 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 KCNJ13O60928 360 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 SBK2P0C263 348 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 DNASE1P24855 282 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 GIFP27352 417 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 EEF1A1P68104 462 aaKnown RBP15.12■□□□□ 0.01
SHMT2-232ENST00000557487 BAMBIQ13145 260 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 ACSM3Q53FZ2 586 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 GARNL3Q5VVW2 1013 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 IL20RBQ6UXL0 311 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF836Q6ZNA1 936 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 TMPRSS11FQ6ZWK6 438 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 EID2Q8N6I1 236 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 MFSD9Q8NBP5 474 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 PGLYRP3Q96LB9 341 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 C12orf66Q96MD2 445 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 LRFN5Q96NI6 719 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 TEAD3Q99594 435 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 PRSS27Q9BQR3 290 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 TRMT61BQ9BVS5 477 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms