RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 COPS7AQ9UBW8 275 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 KLF13Q9Y2Y9 288 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-230ENST00000557427 ANK2Q01484 3957 aa11.41□□□□□ -0.58
SHMT2-230ENST00000557427 A0A1W2PRB8 838 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 A0A1W2PS29 197 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 G3V3Y1 287 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 KLRC4-KLRK1H3BQV0 150 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 CDK2AP1O14519 115 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 EI24O14681 340 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 ARHGEF9O43307 516 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 C6orf47O95873 294 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 CST1P01037 141 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 MT-ND1P03886 318 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 SEMG1P04279 462 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 MYF6P23409 242 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 SOX3P41225 446 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 XKP51811 444 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 HBA1P69905 142 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 RBBP4Q09028 425 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 MERTKQ12866 999 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 DAG1Q14118 895 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 HEPACAMQ14CZ8 416 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 ADRM1Q16186 407 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 MPEG1Q2M385 716 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 SLC36A3Q495N2 470 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 CBLL1Q75N03 491 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 EIF3MQ7L2H7 374 aaKnown RBP11.4□□□□□ -0.58
SHMT2-230ENST00000557427 C7orf57Q8NEG2 295 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 RASL10BQ96S79 203 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 SLC35A5Q9BS91 424 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 ADI1Q9BV57 179 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 FAM192AQ9GZU8 254 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 DEPPQ9NTK1 212 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 TAS2R9Q9NYW1 312 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 USE1Q9NZ43 259 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 ERVK-19Q9WJR5 959 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 LIPGQ9Y5X9 500 aa11.4□□□□□ -0.58
SHMT2-230ENST00000557427 H0YAE9 185 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 ZNF354AO60765 605 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-230ENST00000557427 KRT75O95678 551 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 F12P00748 615 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-230ENST00000557427 C1QCP02747 245 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 LINGO3P0C6S8 592 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 SLC35E2P0CK97 266 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 SMIM18P0DKX4 95 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 EPXP11678 715 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 EFNA1P20827 205 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-230ENST00000557427 UQCRC2P22695 453 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 CAPGP40121 348 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 PEX19P40855 299 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 FRKP42685 505 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-230ENST00000557427 ALDH3A2P51648 485 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 MVDP53602 400 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 KRTAP1-1Q07627 177 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 PRSS53Q2L4Q9 553 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 NDUFAF5Q5TEU4 345 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 SEM1Q6ZVN7 128 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 ZDHHC13Q8IUH4 622 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 P3H2Q8IVL5 708 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 DHRSXQ8N5I4 330 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 C11orf65Q8NCR3 313 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 OR4K14Q8NGD5 310 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 OR5K1Q8NHB7 308 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 OR5P2Q8WZ92 322 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 CIDECQ96AQ7 238 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-230ENST00000557427 GAL3ST4Q96RP7 486 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 MRPS26Q9BYN8 205 aaKnown RBP11.39□□□□□ -0.59
SHMT2-230ENST00000557427 TMEM38AQ9H6F2 299 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 ZDHHC11Q9H8X9 412 aa11.39□□□□□ -0.59
SHMT2-230ENST00000557427 FAM166BA8MTA8 275 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 G3V2T6 193 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 GUCY1B2O75343 617 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 TNFRSF21O75509 655 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 ERAL1O75616 437 aaKnown RBP11.38□□□□□ -0.59
SHMT2-230ENST00000557427 HRGP04196 525 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 IGKV3-11P04433 115 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 NT5EP21589 574 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 FEN1P39748 380 aaKnown RBP11.38□□□□□ -0.59
SHMT2-230ENST00000557427 ALDH9A1P49189 494 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 ADARB1P78563 741 aaKnown RBP11.38□□□□□ -0.59
SHMT2-230ENST00000557427 EPS8Q12929 822 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 APOFQ13790 326 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 GK3PQ14409 553 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 MLC1Q15049 377 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 POU4F3Q15319 338 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 LRRC23Q53EV4 343 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-230ENST00000557427 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.38□□□□□ -0.59
SHMT2-230ENST00000557427 GCNT6Q5T4J0 391 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 KRT80Q6KB66 452 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 FAM180BQ6P0A1 224 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 TBPL2Q6SJ96 375 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 CCDC80Q76M96 950 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 PIWIL3Q7Z3Z3 882 aaKnown RBP11.38□□□□□ -0.59
SHMT2-230ENST00000557427 ZDHHC21Q8IVQ6 265 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 SLC30A8Q8IWU4 369 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 C9orf40Q8IXQ3 194 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 LRRC75A-AS1Q8N1F1 130 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 PSD4Q8NDX1 1056 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 OR8K3Q8NH51 312 aa11.38□□□□□ -0.59
SHMT2-230ENST00000557427 ZFP28Q8NHY6 868 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms