RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ADAM23O75077 832 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 BMP2P12643 396 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 HSD17B1P14061 328 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 HCCSP53701 268 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ADIRFQ15847 76 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 OR52W1Q6IF63 320 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 OTOP3Q7RTS5 596 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SAMD7Q7Z3H4 446 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF454Q8N9F8 522 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 PXT1Q8NFP0 134 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 OR4A16Q8NH70 328 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 IFI44Q8TCB0 444 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 SLC7A7Q9UM01 511 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 HHLA2Q9UM44 414 aa8.36□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM212A6NML5 194 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ANKRD66B4E2M5 251 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 MRPL3P09001 348 aaKnown RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM183BQ1AE95 376 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 PLAG1Q6DJT9 500 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ASRGL1Q7L266 308 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 SMIM12Q96EX1 92 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 DEFB126Q9BYW3 111 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 FBRSQ9HAH7 460 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 NIT2Q9NQR4 276 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 RAET1LQ5VY80 246 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 RNLSQ5VYX0 342 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 Q6ZRG5 221 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 SYNPRQ8TBG9 265 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF582Q96NG8 517 aaPredicted RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 PURBQ96QR8 312 aaKnown RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 PUS1Q9Y606 427 aaKnown RBP eCLIP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ZFP37Q9Y6Q3 630 aaPredicted RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 TEX50A0A1B0GTY4 177 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 LY86O95711 162 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ACP2P11117 423 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 FOLR1P15328 257 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 APOFQ13790 326 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 EARS2Q5JPH6 523 aaKnown RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 TEX261Q6UWH6 196 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ZFAND4Q86XD8 727 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 B3GAT1Q9P2W7 334 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 GMEB2Q9UKD1 530 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 MCTS1Q9ULC4 181 aaKnown RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 U3KQ87 197 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 AGPAT2O15120 278 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 G6PDP11413 515 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 OGFOD3Q6PK18 319 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 GOLGA7Q7Z5G4 137 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 RABEPKQ7Z6M1 372 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 CISD2Q8N5K1 135 aaKnown RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 C11orf98E9PRG8 122 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 TIA1P31483 386 aaKnown RBP eCLIP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 TPMTP51580 245 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 PPP2CAP67775 309 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 OR1J2Q8NGS2 313 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 LINC01599Q8WXQ3 324 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 GNPNAT1Q96EK6 184 aaPredicted RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 LYSMD1Q96S90 227 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 TGIF2Q9GZN2 237 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 C11orf49Q9H6J7 331 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ACSS1Q9NUB1 689 aaPredicted RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 OARD1Q9Y530 152 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 FMN2Q9NZ56 1722 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM82A0PJX8 343 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 M0R143 59 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 GPRIN2O60269 458 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 NDUFB2O95178 105 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ACVR1BP36896 505 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ATP1B3P54709 279 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 GALNT1Q10472 559 aaPredicted RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 YIPF5Q969M3 257 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 MTHFD2LQ9H903 347 aaPredicted RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 MED17Q9NVC6 651 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ANKMY1Q9P2S6 941 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 EVLQ9UI08 416 aaPredicted RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ACTL7AQ9Y615 435 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 PTPRMP28827 1452 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 MSI1O43347 362 aaKnown RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 DUSP6Q16828 381 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ARHGAP11BQ3KRB8 267 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 LCN8Q6JVE9 175 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 PAQR3Q6TCH7 311 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 DHRS11Q6UWP2 260 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 OR52P1PQ8NH57 321 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 SPATA31A1Q5TZJ5 1347 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 CRYM-AS1A6NIL9 109 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 M0R3H8 397 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 PTBP3O95758 552 aaKnown RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 BPIFB3P59826 476 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 TRIP12Q14669 1992 aaPredicted RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 MBLAC2Q68D91 279 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ANKRD31Q8N7Z5 1873 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF536O15090 1300 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 OR2C1O95371 312 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 ITGB2P05107 769 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 CLEC3BP05452 202 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 OSMP13725 252 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 CTRB1P17538 263 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 USF1P22415 310 aaPredicted RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 TACR3P29371 465 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms