RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 GJE1A6NN92 205 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 NPIPA7E9PJI5 369 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 H7C1Q1 480 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 OIP5O43482 229 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 NUDT17P0C025 328 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 NPIPA8P0DM63 369 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 NID1P14543 1247 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 PRPS1L1P21108 318 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 SHC1P29353 583 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 SUMO3P55854 103 aaPredicted RBP14.17□□□□□ -0.14
TUBB3-213ENST00000557262 FOXF1Q12946 379 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 RNPS1Q15287 305 aaKnown RBP14.17□□□□□ -0.14
TUBB3-213ENST00000557262 ZNF239Q16600 458 aaKnown RBP14.17□□□□□ -0.14
TUBB3-213ENST00000557262 TMEM176BQ3YBM2 270 aaPredicted RBP14.17□□□□□ -0.14
TUBB3-213ENST00000557262 ZNF704Q6ZNC4 412 aaPredicted RBP14.17□□□□□ -0.14
TUBB3-213ENST00000557262 WFDC8Q8IUA0 241 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 RIMKLAQ8IXN7 391 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 CIARTQ8N365 385 aaPredicted RBP14.17□□□□□ -0.14
TUBB3-213ENST00000557262 KRTCAP2Q8N6L1 136 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 FNDC5Q8NAU1 212 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 SFXN5Q8TD22 340 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 GPR119Q8TDV5 335 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 RNF128Q8TEB7 428 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 NUDT8Q8WV74 236 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 TRIM44Q96DX7 344 aaPredicted RBP14.17□□□□□ -0.14
TUBB3-213ENST00000557262 ARSGQ96EG1 525 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 PLPPR2Q96GM1 343 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 ROPN1BQ9BZX4 212 aaPredicted RBP14.17□□□□□ -0.14
TUBB3-213ENST00000557262 BHLHE41Q9C0J9 482 aaPredicted RBP14.17□□□□□ -0.14
TUBB3-213ENST00000557262 L2HGDHQ9H9P8 463 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 ROPN1Q9HAT0 212 aaPredicted RBP14.17□□□□□ -0.14
TUBB3-213ENST00000557262 LGALS13Q9UHV8 139 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 DTNAQ9Y4J8 743 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 ABCA2Q9BZC7 2435 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 HEATR5AQ86XA9 2040 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 NPIPB9F8W1W9 429 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 CFLARO15519 480 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 PRKD3O94806 890 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 PLAUP00749 431 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 ARRB2P32121 409 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 IFFO1Q0D2I5 559 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 TOMM34Q15785 309 aaPredicted RBP14.16□□□□□ -0.14
TUBB3-213ENST00000557262 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.16□□□□□ -0.14
TUBB3-213ENST00000557262 BHLHB9Q6PI77 547 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 TUSC5Q8IXB3 177 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 STEAP2Q8NFT2 490 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 ABHD3Q8WU67 409 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 TMEM171Q8WVE6 324 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 IGFBPL1Q8WX77 278 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 SDF2Q99470 211 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 TMEM204Q9BSN7 226 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 DUSP26Q9BV47 211 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 SRXN1Q9BYN0 137 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 GP6Q9HCN6 339 aa14.16□□□□□ -0.14
TUBB3-213ENST00000557262 EIF4E2O60573 245 aaKnown RBP14.15□□□□□ -0.14
TUBB3-213ENST00000557262 TMCC2O75069 709 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 SKAP2O75563 359 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-213ENST00000557262 GCM2O75603 506 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-213ENST00000557262 YES1P07947 543 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 PAX1P15863 534 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 PRKCAP17252 672 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 PTH2RP49190 550 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 RNF144AP50876 292 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-213ENST00000557262 MAD2L1Q13257 205 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-213ENST00000557262 SLC25A53Q5H9E4 307 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 FCRLAQ7L513 359 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 NUFIP2Q7Z417 695 aaKnown RBP14.15□□□□□ -0.14
TUBB3-213ENST00000557262 SLC43A2Q8N370 569 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 ZNF611Q8N823 705 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 ATP6V1C2Q8NEY4 427 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 TUBGCP3Q96CW5 907 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 MRGPRX4Q96LA9 322 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 OR7D2Q96RA2 312 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 ANKZF1Q9H8Y5 726 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 KLHL13Q9P2N7 655 aa14.15□□□□□ -0.14
TUBB3-213ENST00000557262 RAI1Q7Z5J4 1906 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-213ENST00000557262 NSD1Q96L73 2696 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-213ENST00000557262 ROS1P08922 2347 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 TRIM64A6NGJ6 449 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 TRIM64BA6NI03 449 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 DUXAA6NLW8 204 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 HS3ST1O14792 307 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 SMAD7O15105 426 aaKnown RBP14.14□□□□□ -0.15
TUBB3-213ENST00000557262 ZNF264O43296 627 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 NTN1O95631 604 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 BPGMP07738 259 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 G6PDP11413 515 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 MATN1P21941 496 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 CLDN8P56748 225 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 C21orf58P58505 322 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 RAC3P60763 192 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 HBA1P69905 142 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 EMX2Q04743 252 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 PGS1Q32NB8 556 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 NDUFAF6Q330K2 333 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 SFRP5Q5T4F7 317 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 TFAP2EQ6VUC0 442 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 GABRG1Q8N1C3 465 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 ZNF614Q8N883 585 aa14.14□□□□□ -0.15
TUBB3-213ENST00000557262 TOR1AIP2Q8NFQ8 470 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms