RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 BTNL2Q9UIR0 455 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 C19orf53Q9UNZ5 99 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ZNF337Q9Y3M9 751 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ZNF175Q9Y473 711 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 C16orf97H3BN30 126 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 UPK1AO00322 258 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 SLC22A2O15244 555 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 CCDC22O60826 627 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 POU2F1P14859 743 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 PAX1P15863 534 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 FPR1P21462 350 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 CLDN20P56880 219 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 HBA1P69905 142 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 MRPS22P82650 360 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 HSPB3Q12988 150 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 TMEM44Q2T9K0 475 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 C20orf204Q6ZNR8 217 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ZNF550Q7Z398 422 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 P4HA3Q7Z4N8 544 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 YTHDF3Q7Z739 585 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 UBQLNLQ8IYU4 475 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 MEIOBQ8N635 442 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 METTL25Q8N6Q8 603 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ANKS4BQ8N8V4 417 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 CNEP1R1Q8N9A8 125 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ZNF610Q8N9Z0 462 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 OR4K17Q8NGC6 315 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 FNDC9Q8TBE3 224 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ZNF845Q96IR2 970 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 CCDC115Q96NT0 180 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 MED18Q9BUE0 208 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 BDH2Q9BUT1 245 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 GSX2Q9BZM3 304 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 TAS2R9Q9NYW1 312 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 MED11Q9P086 117 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 CCDC167Q9P0B6 97 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 PPP4R1LQ9P1A2 415 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ABCG2Q9UNQ0 655 aa9.63□□□□□ -0.87
HNRNPC-230ENST00000557201 ARID1AO14497 2285 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 IGLV3-32A0A0A0MS00 114 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 OR2M5A3KFT3 312 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 TRIM64A6NGJ6 449 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 TRIM64BA6NI03 449 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 C9JVG2 144 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 LINC01387J3KSC0 135 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 KLF4O43474 513 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 SCO2O43819 266 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 AQP8O94778 261 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 C6orf47O95873 294 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 THBDP07204 575 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 HK1P19367 917 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 KRT20P35900 424 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 EEFSECP57772 596 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 SF3A3Q12874 501 aaKnown RBP eCLIP9.62□□□□□ -0.878e-8■■■□□ 16.9
HNRNPC-230ENST00000557201 CAPRIN1Q14444 709 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 GANABQ14697 944 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 GLYR1Q49A26 553 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 CYP27C1Q4G0S4 372 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 AGKQ53H12 422 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 RAET1LQ5VY80 246 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 TMEM107Q6UX40 140 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 CHMP1BQ7LBR1 199 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 GGNQ86UU5 652 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 OR5M1Q8NGP8 315 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 C1GALT1C1Q96EU7 318 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 CCL19Q99731 98 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 SLC39A3Q9BRY0 314 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 PINK1Q9BXM7 581 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 NMUR2Q9GZQ4 415 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 UBTD1Q9HAC8 227 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 C3orf14Q9HBI5 128 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 SIRT3Q9NTG7 399 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 DDX18Q9NVP1 670 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 PCDHGB4Q9UN71 923 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 ARL2BPQ9Y2Y0 163 aa9.62□□□□□ -0.87
HNRNPC-230ENST00000557201 PCNX3Q9H6A9 2034 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 A0A1W2PP18 115 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 CFLARO15519 480 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 COQ9O75208 318 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 IL33O95760 270 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 EFNA1P20827 205 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 TBXA2RP21731 343 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 GPC1P35052 558 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 SIRPAP78324 504 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 PRR5P85299 388 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 FGFBP1Q14512 234 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 PON3Q15166 354 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 VPS26BQ4G0F5 336 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 TIGD2Q4W5G0 525 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 GKAP1Q5VSY0 366 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 BHLHB9Q6PI77 547 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 APOOLQ6UXV4 268 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 MTDHQ86UE4 582 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 CLECL1Q8IZS7 167 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 SFXN5Q8TD22 340 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 HOXB13Q92826 284 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 VPS33AQ96AX1 596 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 MOAP1Q96BY2 351 aa9.61□□□□□ -0.87
HNRNPC-230ENST00000557201 SPDL1Q96EA4 605 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms