RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 LIPMQ5VYY2 423 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 HMBOX1Q6NT76 420 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 Q6ZSR9 355 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 OLIG3Q7RTU3 272 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 C10orf107Q8IVU9 208 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 C4orf33Q8N1A6 199 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 GABRG1Q8N1C3 465 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 OR7A2PQ8NGA2 310 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 FAM110BQ8TC76 370 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 ACTRT2Q8TDY3 377 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 HTRA1Q92743 480 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 TRMT61AQ96FX7 289 aaKnown RBP13.13□□□□□ -0.31
CHD8-211ENST00000556833 CCT7Q99832 543 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 COQ10BQ9H8M1 238 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 ANKZF1Q9H8Y5 726 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 SIRT3Q9NTG7 399 aaPredicted RBP13.13□□□□□ -0.31
CHD8-211ENST00000556833 RNF212BA8MTL3 300 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 NPIPB8E9PQR5 432 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 AZIN1O14977 448 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 SOX30O94993 753 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 CPA3P15088 417 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 ATP6V1C1P21283 382 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 C21orf58P58505 322 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 SPDYE7PQ495Y7 208 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 ZNF672Q499Z4 452 aaPredicted RBP13.12□□□□□ -0.31
CHD8-211ENST00000556833 GTF2IRD2BQ6EKJ0 949 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 BHLHA15Q7RTS1 189 aaPredicted RBP13.12□□□□□ -0.31
CHD8-211ENST00000556833 GTF2IRD2Q86UP8 949 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 OR5AK3PQ8NH89 298 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 CPNE4Q96A23 557 aaPredicted RBP13.12□□□□□ -0.31
CHD8-211ENST00000556833 ZNF300Q96RE9 604 aaPredicted RBP13.12□□□□□ -0.31
CHD8-211ENST00000556833 C1orf50Q9BV19 199 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 BTBD2Q9BX70 525 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 SLCO5A1Q9H2Y9 848 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 ESRP2Q9H6T0 727 aaKnown RBP13.12□□□□□ -0.31
CHD8-211ENST00000556833 CXorf36Q9H7Y0 433 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 OXSMQ9NWU1 459 aa13.12□□□□□ -0.31
CHD8-211ENST00000556833 WBP11Q9Y2W2 641 aaKnown RBP13.12□□□□□ -0.31
CHD8-211ENST00000556833 PLCE1Q9P212 2302 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 DPRXA6NFQ7 191 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 ZNF814B7Z6K7 855 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 OVOL3O00110 214 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 GTPBP1O00178 669 aaKnown RBP13.11□□□□□ -0.31
CHD8-211ENST00000556833 LSM1O15116 133 aaKnown RBP13.11□□□□□ -0.31
CHD8-211ENST00000556833 CYP7B1O75881 506 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 IGHV3-9P01782 118 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 CHRNGP07510 517 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 DANCRP0C864 163 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 BCKDHAP12694 445 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 PRPH2P23942 346 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 SLC7A1P30825 629 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 IDUAP35475 653 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 SERPINB4P48594 390 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 DNAJB13P59910 316 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 RPS26P62854 115 aaKnown RBP13.11□□□□□ -0.31
CHD8-211ENST00000556833 PDE7AQ13946 482 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 RNPS1Q15287 305 aaKnown RBP13.11□□□□□ -0.31
CHD8-211ENST00000556833 PGGHGQ32M88 737 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 MISPQ8IVT2 679 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 IFT20Q8IY31 132 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 EPS8L3Q8TE67 593 aaKnown RBP13.11□□□□□ -0.31
CHD8-211ENST00000556833 ZFP90Q8TF47 636 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 FCRL1Q96LA6 429 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 HS6ST2Q96MM7 605 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 IQCGQ9H095 443 aaKnown RBP13.11□□□□□ -0.31
CHD8-211ENST00000556833 QRSL1Q9H0R6 528 aaKnown RBP13.11□□□□□ -0.31
CHD8-211ENST00000556833 TIGARQ9NQ88 270 aa13.11□□□□□ -0.31
CHD8-211ENST00000556833 A0A1W2PQD3 144 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 COPEO14579 308 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 PIP5K1BO14986 540 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 SSX4O60224 188 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 PRKD3O94806 890 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 C6orf47O95873 294 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 IFI6P09912 130 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 PABPC4LP0CB38 370 aaKnown RBP13.1□□□□□ -0.31
CHD8-211ENST00000556833 LAMP1P11279 417 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 ADH6P28332 368 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 SOAT1P35610 550 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 HPCAL1P37235 193 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 EIF1P41567 113 aaKnown RBP13.1□□□□□ -0.31
CHD8-211ENST00000556833 FRKP42685 505 aaPredicted RBP13.1□□□□□ -0.31
CHD8-211ENST00000556833 P2RX1P51575 399 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 CDH11P55287 796 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 PCLAFQ15004 111 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 CCDC153Q494R4 210 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 DCST2Q5T1A1 773 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 HEPHL1Q6MZM0 1159 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 SEZ6L2Q6UXD5 910 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 CLEC4FQ8N1N0 589 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 OR5D16Q8NGK9 328 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 SPATA3Q8NHX4 192 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 GPR119Q8TDV5 335 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 TWIST2Q8WVJ9 160 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 UBLCP1Q8WVY7 318 aaPredicted RBP13.1□□□□□ -0.31
CHD8-211ENST00000556833 HSD17B8Q92506 261 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 OR5B2Q96R09 309 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 MECRQ9BV79 373 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 GATA5Q9BWX5 397 aaPredicted RBP13.1□□□□□ -0.31
CHD8-211ENST00000556833 POTEKPQ9BYX7 375 aa13.1□□□□□ -0.31
CHD8-211ENST00000556833 TXLNGYQ9BZA5 131 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms