RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 C17orf113A0A1B0GUU1 675 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 B8ZZF3 427 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 F5H5P2 479 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 EIF1AYO14602 144 aaKnown RBP14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 CTSAP10619 480 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR52N1Q8NH53 320 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 LRRC37AA6NMS7 1700 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 NUP214P35658 2090 aaPredicted RBP14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 SLC5A10A0PJK1 596 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 PEX14O75381 377 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 PTBP1P26599 531 aaKnown RBP eCLIP14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 S100A10P60903 97 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 GBX1Q14549 363 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR1Q1Q15612 314 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 GAREM2Q75VX8 874 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 SIAH3Q8IW03 269 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR2AJ1Q8NGZ0 328 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 STOML3Q8TAV4 291 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 APH1BQ8WW43 257 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 TMEM43Q9BTV4 400 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 H3BNC9 293 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 SLC22A5O76082 557 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 PRMT2P55345 433 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 PRDX1Q06830 199 aaKnown RBP14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 GPR176Q14439 515 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 MBOAT2Q6ZWT7 520 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR6F1Q8NGZ6 308 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR5K2Q8NHB8 316 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 ABHD4Q8TB40 342 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 EMC7Q9NPA0 242 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 FZD3Q9NPG1 666 aa14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZNFX1Q9P2E3 1918 aaKnown RBP14.06□□□□□ -0.16
ARHGEF40-207ENST00000556399 TEX51A0A1B0GUA7 166 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 DSCR3O14972 297 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 S1PR1P21453 382 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 PKLRP30613 574 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 EIF1AXP47813 144 aaKnown RBP14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 FXYD6P3P58550 94 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 CDK3Q00526 305 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 FGL1Q08830 312 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 MAPK14Q16539 360 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 DCST2Q5T1A1 773 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 APOOLQ6UXV4 268 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR13C2Q8NGS9 318 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 GHSRQ92847 366 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 RIT1Q92963 219 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 B3GNT2Q9NY97 397 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 B4DGG1 531 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 HMGN4O00479 90 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 WISP3O95389 354 aaPredicted RBP14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 GDNFP39905 211 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 ETV6P41212 452 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 CCR6P51684 374 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 CEBPGP53567 150 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 WNT3P56703 355 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 HENMT1Q5T8I9 393 aaKnown RBP14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 DNM1P34Q6PK57 102 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 TMEM205Q6UW68 189 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 KIAA1958Q8N8K9 716 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR5M3Q8NGP4 307 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 SAV1Q9H4B6 383 aaPredicted RBP14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 TRAPPC4Q9Y296 219 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 MCM3APO60318 1980 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 ARRDC5A6NEK1 342 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 SSX4O60224 188 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 UBL3O95164 117 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 ELK1P19419 428 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 AIMP2Q13155 320 aaKnown RBP14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 HNRNPA1L2Q32P51 320 aaKnown RBP14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 FAM76BQ5HYJ3 339 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 KCTD18Q6PI47 426 aaPredicted RBP14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZER1Q7Z7L7 766 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR52E1Q8NGJ3 308 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 TMEM255BQ8WV15 326 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZC3H10Q96K80 434 aaKnown RBP14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 DHRS1Q96LJ7 313 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 CCL26Q9Y258 94 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 V9GY05 133 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 C2orf74A8MZ97 194 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 SRP9P49458 86 aaKnown RBP14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 NRG3P56975 720 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 BTG1P62324 171 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 IFITM3Q01628 133 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 RAB11BQ15907 218 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZNF322Q6U7Q0 402 aaPredicted RBP14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 BTN2A1Q7KYR7 527 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 GLCCI1Q86VQ1 547 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 MSLNLQ96KJ4 702 aa14.05□□□□□ -0.16
ARHGEF40-207ENST00000556399 POM121CA8CG34 1229 aa14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 AMY2AP04746 511 aa14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 FPR3P25089 353 aa14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 PTPN6P29350 595 aa14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 SLC6A11P48066 632 aa14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 GZMKP49863 264 aa14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 MRPS10P82664 201 aaKnown RBP14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 FABP5Q01469 135 aa14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 BTN1A1Q13410 526 aa14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 CST6Q15828 149 aa14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 CDNFQ49AH0 187 aa14.04□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZC3H14Q6PJT7 736 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms