RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	APCDD1L	Q8NCL9	501 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	SIMC1	Q8NDZ2	872 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR7A2P	Q8NGA2	310 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR52R1	Q8NGF1	315 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR9A2	Q8NGT5	310 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	ACTRT2	Q8TDY3	377 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	FAR1	Q8WVX9	515 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	TLCD1	Q96CP7	247 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	CNRIP1	Q96F85	164 aa	Predicted RBP	4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	RASL10B	Q96S79	203 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	DPY30	Q9C005	99 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	C20orf27	Q9GZN8	174 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	CLMP	Q9H6B4	373 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	REEP4	Q9H6H4	257 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	SMURF2	Q9HAU4	748 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	C3orf14	Q9HBI5	128 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	OLAH	Q9NV23	265 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	INTS9	Q9NV88	658 aa	Known RBP	4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	THAP1	Q9NVV9	213 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	EHD3	Q9NZN3	535 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	SEC14L3	Q9UDX4	400 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZNF223	Q9UK11	482 aa	Predicted RBP	4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	CES1P1	Q9UKY3	287 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	PCDHGB4	Q9UN71	923 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	NTNG1	Q9Y2I2	539 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	LAMA5	O15230	3695 aa		4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	HEATR1	Q9H583	2144 aa	Known RBP	4.27	□□□□□ -1.73
ATXN3-238	ENST00000556288	INTS1	Q8N201	2190 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	TRGV8	A0A0C4DH27	118 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288		A0A1W2PRB8	838 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR6C76	A6NM76	312 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	TRPC5OS	A6NMA1	111 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	MYO1G	B0I1T2	1018 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	LSM1	O15116	133 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	BCAS2	O75934	225 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	G6PD	P11413	515 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	PRPS2	P11908	318 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	H2AFX	P16104	143 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	ABO	P16442	354 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	DDX5	P17844	614 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	LBP	P18428	481 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	SDC1	P18827	310 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	IL12B	P29460	328 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	ARRB2	P32121	409 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	GABRA3	P34903	492 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	SOAT1	P35610	550 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	PIGA	P37287	484 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	GSTM5	P46439	218 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	UQCRFS1	P47985	274 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	DNASE1L1	P49184	302 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	CASP9	P55211	416 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	CASP6	P55212	293 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	WNT3	P56703	355 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	SLC37A1	P57057	533 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	FBXW4	P57775	412 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	KCNK10	P57789	538 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	PPIA	P62937	165 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	RPP38	P78345	283 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	IGLV3-21	P80748	117 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	EMX2	Q04743	252 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	RBPJ	Q06330	500 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZNF155	Q12901	538 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	PTGR1	Q14914	329 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZNHIT3	Q15649	155 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	PRICKLE4	Q2TBC4	344 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	PLA1A	Q53H76	456 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	TTMP	Q5BVD1	217 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	TNFAIP8L3	Q5GJ75	292 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	TMEM198	Q66K66	360 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	FAM71E1	Q6IPT2	247 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	ANGPTL8	Q6UXH0	198 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	C9orf40	Q8IXQ3	194 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	KRTCAP2	Q8N6L1	136 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	MDS2	Q8NDY4	140 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR7G1	Q8NGA0	311 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	C16orf52	Q8NHV5	167 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	FAM76A	Q8TAV0	307 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	FBXO30	Q8TB52	745 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	GPR151	Q8TDV0	419 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	MARK4	Q96L34	752 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	RILP	Q96NA2	401 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	TAAR6	Q96RI8	345 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	SORT1	Q99523	831 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZBTB18	Q99592	522 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	WWTR1	Q9GZV5	400 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	NXF5	Q9H1B4	397 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	GLIPR2	Q9H4G4	154 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	METTL7A	Q9H8H3	244 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	MYNN	Q9NPC7	610 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	DDX18	Q9NVP1	670 aa	Known RBP	4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	TAS2R9	Q9NYW1	312 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	MAT2B	Q9NZL9	334 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	PRODH2	Q9UF12	536 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	CFL2	Q9Y281	166 aa		4.26	□□□□□ -1.73
ATXN3-238	ENST00000556288	WBP11	Q9Y2W2	641 aa	Known RBP	4.26	□□□□□ -1.73

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