RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 NPIPA8P0DM63 369 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 LAMP1P11279 417 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 ALDH3A1P30838 453 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 CCT3P49368 545 aaKnown RBP16.77■□□□□ 0.28
CDKN3-209ENST00000556102 KLHL26Q53HC5 615 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 XKR7Q5GH72 579 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 DCST2Q5T1A1 773 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 CBLN3Q6UW01 205 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 TFAP2EQ6VUC0 442 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 GABRG1Q8N1C3 465 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 NATD1Q8N6N6 113 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 FBXO27Q8NI29 283 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 ADAMTS15Q8TE58 950 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 TACO1Q9BSH4 297 aaKnown RBP16.77■□□□□ 0.28
CDKN3-209ENST00000556102 HDHD5Q9BXW7 423 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 SRXN1Q9BYN0 137 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 GP6Q9HCN6 339 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 ATAD3AQ9NVI7 634 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 KLHL13Q9P2N7 655 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 ICAM5Q9UMF0 924 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 FAF1Q9UNN5 650 aaPredicted RBP16.77■□□□□ 0.28
CDKN3-209ENST00000556102 CARD8Q9Y2G2 431 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 GPC6Q9Y625 555 aaPredicted RBP16.77■□□□□ 0.28
CDKN3-209ENST00000556102 ZNF195O14628 629 aa16.76■□□□□ 0.27
CDKN3-209ENST00000556102 PEX11AO75192 247 aa16.76■□□□□ 0.27
CDKN3-209ENST00000556102 GCM2O75603 506 aaPredicted RBP16.76■□□□□ 0.27
CDKN3-209ENST00000556102 LYPLA1O75608 230 aaPredicted RBP16.76■□□□□ 0.27
CDKN3-209ENST00000556102 PCSK6P29122 969 aa16.76■□□□□ 0.27
CDKN3-209ENST00000556102 TP53BP2Q13625 1128 aa16.76■□□□□ 0.27
CDKN3-209ENST00000556102 ATP6AP1LQ52LC2 224 aa16.76■□□□□ 0.27
CDKN3-209ENST00000556102 NUFIP2Q7Z417 695 aaKnown RBP16.76■□□□□ 0.27
CDKN3-209ENST00000556102 BANPQ8N9N5 519 aa16.76■□□□□ 0.27
CDKN3-209ENST00000556102 AKAP1Q92667 903 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDKN3-209ENST00000556102 S100PBPQ96BU1 408 aa16.76■□□□□ 0.27
CDKN3-209ENST00000556102 MECRQ9BV79 373 aa16.76■□□□□ 0.27
CDKN3-209ENST00000556102 CXorf36Q9H7Y0 433 aa16.76■□□□□ 0.27
CDKN3-209ENST00000556102 GPATCH2Q9NW75 528 aa16.76■□□□□ 0.27
CDKN3-209ENST00000556102 GTPBP1O00178 669 aaKnown RBP16.75■□□□□ 0.27
CDKN3-209ENST00000556102 C6orf47O95873 294 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 RNF144AP50876 292 aaPredicted RBP16.75■□□□□ 0.27
CDKN3-209ENST00000556102 ATP12AP54707 1039 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 ATP5J2P56134 94 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 PTGR1Q14914 329 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 LSM12Q3MHD2 195 aaKnown RBP16.75■□□□□ 0.27
CDKN3-209ENST00000556102 TMEM176BQ3YBM2 270 aaPredicted RBP16.75■□□□□ 0.27
CDKN3-209ENST00000556102 SPDYE7PQ495Y7 208 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDKN3-209ENST00000556102 FCRLAQ7L513 359 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 TUSC5Q8IXB3 177 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 RIBC1Q8N443 379 aaPredicted RBP16.75■□□□□ 0.27
CDKN3-209ENST00000556102 AGR3Q8TD06 166 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 SFXN5Q8TD22 340 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 GPR119Q8TDV5 335 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 ZFP90Q8TF47 636 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDKN3-209ENST00000556102 MOAP1Q96BY2 351 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 COQ8BQ96D53 544 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 MRGPRX4Q96LA9 322 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 C1orf50Q9BV19 199 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 COQ10BQ9H8M1 238 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 KCNE3Q9Y6H6 103 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 CADP27708 2225 aa16.75■□□□□ 0.27
CDKN3-209ENST00000556102 TLDC2A0PJX2 215 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 NPIPB9F8W1W9 429 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 PRKD3O94806 890 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 PRKCAP17252 672 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 IL32P24001 234 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 PPP2R2BQ00005 443 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 SELENBP1Q13228 472 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 TOMM34Q15785 309 aaPredicted RBP16.74■□□□□ 0.27
CDKN3-209ENST00000556102 NDUFAF6Q330K2 333 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 C6orf136Q5SQH8 315 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 SFRP5Q5T4F7 317 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 ALKBH2Q6NS38 261 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 ADAM5Q6NVV9 412 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 ZCCHC23Q6ZST2 131 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 PRIMA1Q86XR5 153 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 SLC43A2Q8N370 569 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 ZNF614Q8N883 585 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 FNDC5Q8NAU1 212 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 RAB3IL1Q8TBN0 382 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 C3orf30Q96M34 536 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 PRPF18Q99633 342 aaKnown RBP16.74■□□□□ 0.27
CDKN3-209ENST00000556102 NGBQ9NPG2 151 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 SLC17A7Q9P2U7 560 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 DTNAQ9Y4J8 743 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 RNF115Q9Y4L5 304 aa16.74■□□□□ 0.27
CDKN3-209ENST00000556102 SLU7O95391 586 aaKnown RBP16.73■□□□□ 0.27
CDKN3-209ENST00000556102 NTN1O95631 604 aa16.73■□□□□ 0.27
CDKN3-209ENST00000556102 YES1P07947 543 aa16.73■□□□□ 0.27
CDKN3-209ENST00000556102 PRPS1L1P21108 318 aa16.73■□□□□ 0.27
CDKN3-209ENST00000556102 SERPINB5P36952 375 aa16.73■□□□□ 0.27
CDKN3-209ENST00000556102 RPS4XP62701 263 aaKnown RBP16.73■□□□□ 0.27
CDKN3-209ENST00000556102 TSC22D1Q15714 1073 aa16.73■□□□□ 0.27
CDKN3-209ENST00000556102 SLC25A53Q5H9E4 307 aa16.73■□□□□ 0.27
CDKN3-209ENST00000556102 IL23RQ5VWK5 629 aa16.73■□□□□ 0.27
CDKN3-209ENST00000556102 KRTCAP2Q8N6L1 136 aa16.73■□□□□ 0.27
CDKN3-209ENST00000556102 ATP6V1C2Q8NEY4 427 aa16.73■□□□□ 0.27
CDKN3-209ENST00000556102 OR2W6PQ8NHA6 318 aa16.73■□□□□ 0.27
CDKN3-209ENST00000556102 OR7D2Q96RA2 312 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms