RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 EBPQ15125 230 aaKnown RBP13.55□□□□□ -0.24
VPS33B-205ENST00000556096 GPR107Q5VW38 600 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF440Q8IYI8 595 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 PRSS58Q8IYP2 241 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF527Q8NB42 609 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 WDR36Q8NI36 951 aaKnown RBP13.55□□□□□ -0.24
VPS33B-205ENST00000556096 TEX47Q8TBZ9 253 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 RORBQ92753 470 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 OSTF1Q92882 214 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 MPP4Q96JB8 637 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 ACOT13Q9NPJ3 140 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 IL20Q9NYY1 176 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 CNIH4Q9P003 139 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 COPS7AQ9UBW8 275 aa13.55□□□□□ -0.24
VPS33B-205ENST00000556096 COL27A1Q8IZC6 1860 aaPredicted RBP13.55□□□□□ -0.24
VPS33B-205ENST00000556096 VSTM2BA6NLU5 285 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 CSTAP01040 98 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 CSTF2P33240 577 aaKnown RBP eCLIP13.54□□□□□ -0.24
VPS33B-205ENST00000556096 RBM34P42696 430 aaKnown RBP13.54□□□□□ -0.24
VPS33B-205ENST00000556096 SLC15A1P46059 708 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 PCYT1AP49585 367 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 GP2P55259 537 aaKnown RBP13.54□□□□□ -0.24
VPS33B-205ENST00000556096 PSPHP78330 225 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 PRKCDQ05655 676 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 SYT6Q5T7P8 510 aaPredicted RBP13.54□□□□□ -0.24
VPS33B-205ENST00000556096 ACSM5Q6NUN0 579 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 SLC27A4Q6P1M0 643 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 WDR88Q6ZMY6 472 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 ERI1Q8IV48 349 aaKnown RBP13.54□□□□□ -0.24
VPS33B-205ENST00000556096 C9orf40Q8IXQ3 194 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 C17orf47Q8NEP4 570 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 FCGR1BQ92637 280 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 C12orf43Q96C57 262 aaKnown RBP13.54□□□□□ -0.24
VPS33B-205ENST00000556096 IL4I1Q96RQ9 567 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 DSN1Q9H410 356 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 EGLN3Q9H6Z9 239 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 OCIAD1Q9NX40 245 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 TVP23BQ9NYZ1 205 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 FLRT3Q9NZU0 649 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
VPS33B-205ENST00000556096 TMEM5Q9Y2B1 443 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 CEP250Q9BV73 2442 aa13.54□□□□□ -0.24
VPS33B-205ENST00000556096 FER1L5A0AVI2 2057 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 A0A1B0GWA3 101 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 TRIM64BA6NI03 449 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 PIP5K1CO60331 668 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 ADAM11O75078 769 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 TRMUO75648 421 aaKnown RBP13.53□□□□□ -0.24
VPS33B-205ENST00000556096 INMTO95050 263 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 HEXBP07686 556 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 PIPP12273 146 aaPredicted RBP13.53□□□□□ -0.24
VPS33B-205ENST00000556096 ACP1P24666 158 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 MAP2K4P45985 399 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 GPR143P51810 404 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 NUDT6P53370 316 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 CTBP2P56545 445 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 LSAMPQ13449 338 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 FNDC7Q5VTL7 733 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 UBE2UQ5VVX9 321 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 MEDAGQ5VYS4 303 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 HLA-DQA1Q5Y7H0 255 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 TMPRSS11FQ6ZWK6 438 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 SLC29A4Q7RTT9 530 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 MEX3DQ86XN8 651 aaKnown RBP13.53□□□□□ -0.24
VPS33B-205ENST00000556096 CDK20Q8IZL9 346 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 IQCF1Q8N6M8 205 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 TCEANCQ8N8B7 351 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 AGBL5Q8NDL9 886 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 FAM71CQ8NEG0 241 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 B3GNT7Q8NFL0 401 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 OR8D4Q8NGM9 314 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 FGF11Q92914 225 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 EFHD2Q96C19 240 aaPredicted RBP13.53□□□□□ -0.24
VPS33B-205ENST00000556096 HSPBAP1Q96EW2 488 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 LMF1Q96S06 567 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF426Q9BUY5 554 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 PRRG3Q9BZD7 231 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 PLA2G12AQ9BZM1 189 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 SLC26A1Q9H2B4 701 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 AMBNQ9NP70 447 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 DCDC2BA2VCK2 349 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 IDSB3KWA1 339 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 ENTPD6O75354 484 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 UTS2O95399 124 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 CYC1P08574 325 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 TBXA2RP21731 343 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 GPR4P46093 362 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 ST3GAL4Q11206 333 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 TBCEQ15813 527 aaPredicted RBP13.53□□□□□ -0.24
VPS33B-205ENST00000556096 LINC00114Q6XXX2 140 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF620Q6ZNG0 422 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 LANCL3Q6ZV70 420 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 ANKRD37Q7Z713 158 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 STX19Q8N4C7 294 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 BMPERQ8N8U9 685 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 ZNF441Q8N8Z8 693 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 WWTR1Q9GZV5 400 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 APMAPQ9HDC9 416 aa13.53□□□□□ -0.24
VPS33B-205ENST00000556096 EXOSC3Q9NQT5 275 aaKnown RBP13.53□□□□□ -0.24
VPS33B-205ENST00000556096 GPR83Q9NYM4 423 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms