RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.6■□□□□ 0.41
PRKCH-219ENST00000555906 CBLN3Q6UW01 205 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 PLEKHM3Q6ZWE6 761 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 FNDC5Q8NAU1 212 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 TCP10LQ8TDR4 215 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 ADAMTS15Q8TE58 950 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 ABHD3Q8WU67 409 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 OSTF1Q92882 214 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 COQ8BQ96D53 544 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 C3orf30Q96M34 536 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 PRPF18Q99633 342 aaKnown RBP17.6■□□□□ 0.41
PRKCH-219ENST00000555906 TMEM204Q9BSN7 226 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 BDH2Q9BUT1 245 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 SRXN1Q9BYN0 137 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 C12orf49Q9H741 205 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 GP6Q9HCN6 339 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 TIGARQ9NQ88 270 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 KLHL13Q9P2N7 655 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 DNHD1Q96M86 4753 aa17.6■□□□□ 0.41
PRKCH-219ENST00000555906 NPIPA5A0A0B4J1W7 369 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 NPIPA7E9PJI5 369 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 NPIPB9F8W1W9 429 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 OIP5O43482 229 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 SKAP2O75563 359 aaPredicted RBP17.59■□□□□ 0.41
PRKCH-219ENST00000555906 NUDT14O95848 222 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 C6orf47O95873 294 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 NPIPA8P0DM63 369 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 PAX1P15863 534 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 PRPS1L1P21108 318 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 ATP12AP54707 1039 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 C21orf58P58505 322 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 SELENBP1Q13228 472 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 TFAP2EQ6VUC0 442 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 CIARTQ8N365 385 aaPredicted RBP17.59■□□□□ 0.41
PRKCH-219ENST00000555906 FBXO27Q8NI29 283 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 REXO5Q96IC2 774 aaKnown RBP17.59■□□□□ 0.41
PRKCH-219ENST00000555906 BHLHE41Q9C0J9 482 aaPredicted RBP17.59■□□□□ 0.41
PRKCH-219ENST00000555906 COQ10BQ9H8M1 238 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 CARD8Q9Y2G2 431 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 USF3Q68DE3 2245 aa17.59■□□□□ 0.41
PRKCH-219ENST00000555906 SPAG7O75391 227 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 SLU7O95391 586 aaKnown RBP17.58■□□□□ 0.4
PRKCH-219ENST00000555906 NTN1O95631 604 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 PRKCAP17252 672 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 ZNF844Q08AG5 666 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 TMEM201Q5SNT2 666 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 IL23RQ5VWK5 629 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 BHLHB9Q6PI77 547 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 WFDC8Q8IUA0 241 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 RIMKLAQ8IXN7 391 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 KRTCAP2Q8N6L1 136 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 STEAP2Q8NFT2 490 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 ZFP90Q8TF47 636 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 TMEM171Q8WVE6 324 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 ROBO4Q8WZ75 1007 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 PLPPR2Q96GM1 343 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 MRGPRX4Q96LA9 322 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 ANKZF1Q9H8Y5 726 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 DTNAQ9Y4J8 743 aa17.58■□□□□ 0.4
PRKCH-219ENST00000555906 HIVEP2P31629 2446 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 ETV2O00321 342 aaPredicted RBP17.57■□□□□ 0.4
PRKCH-219ENST00000555906 ZNF195O14628 629 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 HS3ST1O14792 307 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 EFNA2O43921 213 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 GCM2O75603 506 aaPredicted RBP17.57■□□□□ 0.4
PRKCH-219ENST00000555906 LY6G6DO95868 133 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 IFFO1Q0D2I5 559 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 SLC25A53Q5H9E4 307 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 FCRLAQ7L513 359 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 GABRG1Q8N1C3 465 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 ZNF611Q8N823 705 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 ZNF614Q8N883 585 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 OR5AK3PQ8NH89 298 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 GPR119Q8TDV5 335 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 TUBGCP3Q96CW5 907 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 TRIM44Q96DX7 344 aaPredicted RBP17.57■□□□□ 0.4
PRKCH-219ENST00000555906 OR7D2Q96RA2 312 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 TACO1Q9BSH4 297 aaKnown RBP17.57■□□□□ 0.4
PRKCH-219ENST00000555906 DUSP26Q9BV47 211 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 CXorf56Q9H5V9 222 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 ASIC5Q9NY37 505 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 ZDHHC2Q9UIJ5 367 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 KCNE3Q9Y6H6 103 aa17.57■□□□□ 0.4
PRKCH-219ENST00000555906 TRIM64A6NGJ6 449 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 TRIM64BA6NI03 449 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 GTPBP1O00178 669 aaKnown RBP17.56■□□□□ 0.4
PRKCH-219ENST00000555906 EIF4E2O60573 245 aaKnown RBP17.56■□□□□ 0.4
PRKCH-219ENST00000555906 AK1P00568 194 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 BPGMP07738 259 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 UBL4AP11441 157 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 SOAT1P35610 550 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 RNF144AP50876 292 aaPredicted RBP17.56■□□□□ 0.4
PRKCH-219ENST00000555906 HBA1P69905 142 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 MAD2L1Q13257 205 aaPredicted RBP17.56■□□□□ 0.4
PRKCH-219ENST00000555906 TOMM34Q15785 309 aaPredicted RBP17.56■□□□□ 0.4
PRKCH-219ENST00000555906 NDUFAF6Q330K2 333 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 TMCO5AQ8N6Q1 288 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 TOR1AIP2Q8NFQ8 470 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 OR5D16Q8NGK9 328 aa17.56■□□□□ 0.4
PRKCH-219ENST00000555906 S100PBPQ96BU1 408 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms