RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 KLRF1Q9NZS2 232 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 HRH3Q9Y5N1 445 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 CHCHD2Q9Y6H1 151 aaPredicted RBP9.33□□□□□ -0.92
SRP54-208ENST00000555557 MED13Q9UHV7 2174 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 A0A1W2PQD3 144 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 G3V3Y1 287 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 AHCYL1O43865 530 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 DPM1O60762 260 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 SMNDC1O75940 238 aaKnown RBP eCLIP9.33□□□□□ -0.923e-23■■■■□ 22.6
SRP54-208ENST00000555557 CCL3P10147 92 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 ITPKBP27987 946 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 PTGDSP41222 190 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 CASP3P42574 277 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 LIMS1P48059 325 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 ARHGDIAP52565 204 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 HMGA2P52926 109 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 EPS8Q12929 822 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 KCNAB2Q13303 367 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 MEP1AQ16819 746 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 PPP4R4Q6NUP7 873 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 LINC00696Q6ZRV3 163 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 GDF7Q7Z4P5 450 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 NKAIN4Q8IVV8 208 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 GALNT16Q8N428 558 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 ZNF248Q8NDW4 579 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 PIK3C3Q8NEB9 887 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 FAM71CQ8NEG0 241 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 OR9Q2Q8NGE9 314 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 SLC7A13Q8TCU3 470 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 ITFG2Q969R8 447 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 SLC41A3Q96GZ6 507 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 EPYCQ99645 322 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 METTL7AQ9H8H3 244 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 SLC7A7Q9UM01 511 aa9.33□□□□□ -0.92
SRP54-208ENST00000555557 C7orf72A4D263 438 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 PEX1O43933 1283 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 RASAL1O95294 804 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 LINGO3P0C6S8 592 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 ELAVL4P26378 380 aaKnown RBP9.32□□□□□ -0.92
SRP54-208ENST00000555557 IDH2P48735 452 aaKnown RBP9.32□□□□□ -0.92
SRP54-208ENST00000555557 CLK3P49761 638 aaKnown RBP9.32□□□□□ -0.92
SRP54-208ENST00000555557 CCL11P51671 97 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 GAS1P54826 345 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 ST3GAL3Q11203 375 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 CDC20Q12834 499 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 TOMM34Q15785 309 aaPredicted RBP9.32□□□□□ -0.92
SRP54-208ENST00000555557 MICAQ29983 383 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 DEFB109BQ30KR1 87 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 DCST1Q5T197 706 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 JMJD6Q6NYC1 403 aaPredicted RBP9.32□□□□□ -0.92
SRP54-208ENST00000555557 PODNL1Q6PEZ8 512 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 ZNF550Q7Z398 422 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 HIPK1Q86Z02 1210 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 OFCC1Q8IZS5 231 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 SVOPLQ8N434 492 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 SDCCAG3Q96C92 435 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 DHRS1Q96LJ7 313 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 CCNL2Q96S94 520 aaPredicted RBP9.32□□□□□ -0.92
SRP54-208ENST00000555557 LAT2Q9GZY6 243 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 TMEM27Q9HBJ8 222 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 PLA2G3Q9NZ20 509 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 MED11Q9P086 117 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 TESQ9UGI8 421 aaKnown RBP9.32□□□□□ -0.92
SRP54-208ENST00000555557 DOCK10Q96BY6 2186 aa9.32□□□□□ -0.92
SRP54-208ENST00000555557 CNTRLQ7Z7A1 2325 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 A0A1B0GWA3 101 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 A0A1W2PRQ8 180 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ZNF891A8MT65 544 aaPredicted RBP9.31□□□□□ -0.92
SRP54-208ENST00000555557 TP53I11O14683 189 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 OR5F1O95221 314 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 WISP1O95388 367 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 NUDT14O95848 222 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 POU2F1P14859 743 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 DAPP51397 102 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 RRADP55042 308 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 OC90Q02509 493 aaPredicted RBP9.31□□□□□ -0.92
SRP54-208ENST00000555557 DGCR6Q14129 220 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ZSWIM7Q19AV6 140 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 COL28A1Q2UY09 1125 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ABHD17BQ5VST6 288 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 SPINK14Q6IE38 97 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 WDR88Q6ZMY6 472 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ZNF227Q86WZ6 799 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 MEX3DQ86XN8 651 aaKnown RBP9.31□□□□□ -0.92
SRP54-208ENST00000555557 CYP4Z2PQ8N1L4 340 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 CATSPER1Q8NEC5 780 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 OR10G2Q8NGC3 310 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 GIPC3Q8TF64 312 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 TMEM255BQ8WV15 326 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 RNF138Q8WVD3 245 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 OIT3Q8WWZ8 545 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 FEVQ99581 238 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ZNF559Q9BR84 538 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 OSBPL10Q9BXB5 764 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 TEKT2Q9UIF3 430 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ICAM5Q9UMF0 924 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 POLHQ9Y253 713 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 APC2O95996 2303 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 HEATR5AQ86XA9 2040 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms