RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PON3Q15166 354 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 CTU2Q2VPK5 515 aaKnown RBP18.44■□□□□ 0.54
VTI1B-205ENST00000555543 GTDC1Q4AE62 458 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 ATAD3BQ5T9A4 648 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 P4HA3Q7Z4N8 544 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 HMGN2P46Q86SG4 172 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 MIER2Q8N344 545 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 TRIML2Q8N7C3 387 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 GPR119Q8TDV5 335 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 CKAP2Q8WWK9 683 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 VPS33AQ96AX1 596 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 LURAP1Q96LR2 239 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 WDR45Q9Y484 360 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 OTOGQ6ZRI0 2925 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 AKAP9Q99996 3911 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 A0A1W2PNV4 684 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 RFXANKO14593 260 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 POLR3GO15318 223 aaPredicted RBP18.43■□□□□ 0.54
VTI1B-205ENST00000555543 ZNF264O43296 627 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 EFNA2O43921 213 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 BCAS1O75363 584 aaPredicted RBP18.43■□□□□ 0.54
VTI1B-205ENST00000555543 SHC1P29353 583 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 POLR2JP52435 117 aaKnown RBP18.43■□□□□ 0.54
VTI1B-205ENST00000555543 AQP5P55064 265 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 SKP2Q13309 424 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 TMCO5AQ8N6Q1 288 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 RFWD2Q8NHY2 731 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 ZG16BQ96DA0 208 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 SAP130Q9H0E3 1048 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 ACBD3Q9H3P7 528 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 ZNF446Q9NWS9 450 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 KCNN3Q9UGI6 736 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 ZNF175Q9Y473 711 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 CREBBPQ92793 2442 aa18.43■□□□□ 0.54
VTI1B-205ENST00000555543 FAM234BA2RU67 622 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 EIF4E2O60573 245 aaKnown RBP18.42■□□□□ 0.54
VTI1B-205ENST00000555543 AQP8O94778 261 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 H6PDO95479 791 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 CHRM4P08173 479 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 GUSBP08236 651 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 EIF1AXP47813 144 aaKnown RBP18.42■□□□□ 0.54
VTI1B-205ENST00000555543 MRPL19P49406 292 aaKnown RBP18.42■□□□□ 0.54
VTI1B-205ENST00000555543 CCR4P51679 360 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 MVDP53602 400 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 RAC1P63000 192 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 PLAURQ03405 335 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 MYBPHQ13203 477 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 SYPL1Q16563 259 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 AP1ARQ63HQ0 302 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 MSANTD1Q6ZTZ1 278 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 ANKFN1Q8N957 763 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 OR5W2Q8NH69 310 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 OR10D3Q8NH80 312 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 FBXO27Q8NI29 283 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 ZFP90Q8TF47 636 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 MAGEB18Q96M61 343 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 QRSL1Q9H0R6 528 aaKnown RBP18.42■□□□□ 0.54
VTI1B-205ENST00000555543 RNF122Q9H9V4 155 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 MCCC2Q9HCC0 563 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 POLE3Q9NRF9 147 aa18.42■□□□□ 0.54
VTI1B-205ENST00000555543 HRNRQ86YZ3 2850 aaPredicted RBP18.42■□□□□ 0.54
VTI1B-205ENST00000555543 HEATR5AQ86XA9 2040 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 A0A0J9YW62 118 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 TNFSF11O14788 317 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 CYP7B1O75881 506 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 CSTAP01040 98 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 PRKCAP17252 672 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 EIF1P41567 113 aaKnown RBP18.41■□□□□ 0.54
VTI1B-205ENST00000555543 SLC6A8P48029 635 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 RPS3AP61247 264 aaKnown RBP18.41■□□□□ 0.54
VTI1B-205ENST00000555543 CHRNEQ04844 493 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 FGFBP1Q14512 234 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 GPAT3Q53EU6 434 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 VWA1Q6PCB0 445 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 LUZP2Q86TE4 346 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 ZNF619Q8N2I2 560 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 AURKBQ96GD4 344 aaPredicted RBP18.41■□□□□ 0.54
VTI1B-205ENST00000555543 ZNF559Q9BR84 538 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 CCDC28BQ9BUN5 200 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 LAT2Q9GZY6 243 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 SLC38A1Q9H2H9 487 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 CRIM1Q9NZV1 1036 aa18.41■□□□□ 0.54
VTI1B-205ENST00000555543 CLDN24A6NM45 220 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 ADAMDEC1O15204 470 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 CXCL13O43927 109 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 NTN1O95631 604 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 UBTFL6P0CB48 400 aaPredicted RBP18.4■□□□□ 0.54
VTI1B-205ENST00000555543 ZCCHC18P0CG32 403 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 ME2P23368 584 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 ELK4P28324 431 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 SFTPDP35247 375 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 KIR2DL2P43627 348 aaPredicted RBP18.4■□□□□ 0.54
VTI1B-205ENST00000555543 STX1BP61266 288 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 SIRPAP78324 504 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 QPRTQ15274 297 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 MAPK11Q15759 364 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 SGCBQ16585 318 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 C6orf10Q5SRN2 563 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 OR2A2Q6IF42 318 aa18.4■□□□□ 0.54
VTI1B-205ENST00000555543 SLC2A7Q6PXP3 512 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms