RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 EIPR1Q53HC9 387 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 ENTPD8Q5MY95 495 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 OTUD3Q5T2D3 398 aaPredicted RBP9.83□□□□□ -0.84
TDP1-211ENST00000555178 APLFQ8IW19 511 aaPredicted RBP9.83□□□□□ -0.84
TDP1-211ENST00000555178 GALNT4Q8N4A0 578 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 CBR4Q8N4T8 237 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 TMEM156Q8N614 296 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 EME1Q96AY2 570 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 MCHR1Q99705 422 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 PIP5K1AQ99755 562 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 TBL1XR1Q9BZK7 514 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 COQ10BQ9H8M1 238 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 TRIM45Q9H8W5 580 aaPredicted RBP9.83□□□□□ -0.84
TDP1-211ENST00000555178 MAN2C1Q9NTJ4 1040 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 KLHL28Q9NXS3 571 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 CNOT11Q9UKZ1 510 aaKnown RBP9.83□□□□□ -0.84
TDP1-211ENST00000555178 TRBV4-1A0A0J9YWV2 114 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 CEACAM4O75871 244 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 ANGPTL1O95841 491 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 UBL4AP11441 157 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 RHCEP18577 417 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 CASP3P42574 277 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 ACAA2P42765 397 aaKnown RBP9.83□□□□□ -0.84
TDP1-211ENST00000555178 CCR4P51679 360 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 SKP2Q13309 424 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 EXOC3L2Q2M3D2 409 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 JMJD6Q6NYC1 403 aaPredicted RBP9.83□□□□□ -0.84
TDP1-211ENST00000555178 C19orf48Q6RUI8 117 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 TMCO5AQ8N6Q1 288 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 ZNF527Q8NB42 609 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 FAM71CQ8NEG0 241 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 ADAMTS16Q8TE57 1224 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 RNF138Q8WVD3 245 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 BDH2Q9BUT1 245 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 NMNAT1Q9HAN9 279 aaPredicted RBP9.83□□□□□ -0.84
TDP1-211ENST00000555178 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.83□□□□□ -0.84
TDP1-211ENST00000555178 ACER3Q9NUN7 267 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 ALG1L2C9J202 215 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 EI24O14681 340 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 NDUFB5O43674 189 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 WISP2O76076 250 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 RFC3P40938 356 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 DNASE1L1P49184 302 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 RRADP55042 308 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 AQP4P55087 323 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 TAS2R41P59536 307 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 OC90Q02509 493 aaPredicted RBP9.82□□□□□ -0.84
TDP1-211ENST00000555178 SEC23BQ15437 767 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 FGD3Q5JSP0 725 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 ABHD17BQ5VST6 288 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 ISLR2Q6UXK2 745 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 MEX3DQ86XN8 651 aaKnown RBP9.82□□□□□ -0.84
TDP1-211ENST00000555178 CYP4Z2PQ8N1L4 340 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 OR9Q2Q8NGE9 314 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 OR4C15Q8NGM1 316 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 DUSP19Q8WTR2 217 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 PMM1Q92871 262 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 POP5Q969H6 163 aaKnown RBP9.82□□□□□ -0.84
TDP1-211ENST00000555178 NTNG2Q96CW9 530 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 PRRC1Q96M27 445 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 HOXD1Q9GZZ0 328 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 REEP1Q9H902 201 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 SMURF2Q9HAU4 748 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 KLHL1Q9NR64 748 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 KLRF1Q9NZS2 232 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 ACAD8Q9UKU7 415 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 ZMIZ1Q9ULJ6 1067 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 FAM32AQ9Y421 112 aaKnown RBP9.82□□□□□ -0.84
TDP1-211ENST00000555178 DNAJC13O75165 2243 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 SMG1Q96Q15 3661 aaKnown RBP9.82□□□□□ -0.84
TDP1-211ENST00000555178 TNFRSF11BO00300 401 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 HCRTR2O43614 444 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 GADD45GO95257 159 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 ZNF26P17031 533 aaPredicted RBP9.82□□□□□ -0.84
TDP1-211ENST00000555178 ITGA2P17301 1181 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 MST1P26927 711 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 TMED10P49755 219 aaKnown RBP9.82□□□□□ -0.84
TDP1-211ENST00000555178 HLCSP50747 726 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 EFR3AQ14156 821 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 TOMM34Q15785 309 aaPredicted RBP9.82□□□□□ -0.84
TDP1-211ENST00000555178 LINC00303Q3SY05 128 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 AGAP7PQ5VUJ5 663 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 OPN5Q6U736 354 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 IZUMO2Q6UXV1 221 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 WDR88Q6ZMY6 472 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 LRRC69Q6ZNQ3 347 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 PLEKHM3Q6ZWE6 761 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 STK32CQ86UX6 486 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 GRAMD2AQ8IUY3 354 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 NKAIN4Q8IVV8 208 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 RELTQ969Z4 430 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 AGAP4Q96P64 663 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 ZNF347Q96SE7 839 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 HPF1Q9NWY4 346 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 LRFN1Q9P244 771 aa9.82□□□□□ -0.84
TDP1-211ENST00000555178 G3V2T6 193 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 GTPBP1O00178 669 aaKnown RBP9.81□□□□□ -0.84
TDP1-211ENST00000555178 ZNF264O43296 627 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 NGFRP08138 427 aa9.81□□□□□ -0.84
TDP1-211ENST00000555178 TCEA1P23193 301 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms