RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 FUZQ9BT04 418 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 MED18Q9BUE0 208 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 C19orf24Q9BVV8 132 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 BEX2Q9BXY8 128 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 FRMD8P1Q9BZ68 369 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 TSGA10Q9BZW7 698 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 PELI2Q9HAT8 420 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 LRTM1Q9HBL6 345 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 EIF2B3Q9NR50 452 aaKnown RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ELOVL5Q9NYP7 299 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 PAK5Q9P286 719 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 FETUBQ9UGM5 382 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 DTX4Q9Y2E6 619 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 SLC6A5Q9Y345 797 aa4.37□□□□□ -1.71
ATXN3-228ENST00000554592 CHCHD2Q9Y6H1 151 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-228ENST00000554592 ANK3Q12955 4377 aaKnown RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 SNRNP200O75643 2136 aaKnown RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 IQANK1A0A1B0GTG1 560 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 MAGEB16A2A368 324 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 CTAGE15A4D2H0 777 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 LRIT2A6NDA9 550 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 PABPN1LA6NDY0 278 aaKnown RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 DNAJC9-AS1A6NH13 148 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 LINC01548A6NM66 108 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 BTNL10A8MVZ5 291 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 C16orf97H3BN30 126 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 CDH16O75309 829 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ETHE1O95571 254 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 IGKV3-11P04433 115 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 CRHP06850 196 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 COX7A2P14406 83 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ETS1P14921 441 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 LOXP28300 417 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 TACR3P29371 465 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 TYK2P29597 1187 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 HPDP32754 393 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 GGT5P36269 586 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 UGT2B10P36537 528 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 SLCO1A2P46721 670 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 NAGLUP54802 743 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 MTTPP55157 894 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 LIM2P55344 173 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 AP1S2P56377 157 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 TUBA4AP68366 448 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 RPP38P78345 283 aaKnown RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 SSBP2P81877 361 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 REEP5Q00765 189 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 SRSF4Q08170 494 aaKnown RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 TOMM20Q15388 145 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 SPA17Q15506 151 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 OASLQ15646 514 aaKnown RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 GPR68Q15743 365 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 NTRK2Q16620 822 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 EIPR1Q53HC9 387 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ARL13AQ5H913 290 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF549Q6P9A3 640 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ENPP6Q6UWR7 440 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 C4orf22Q6V702 233 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 MBOAT1Q6ZNC8 495 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 GALNT7Q86SF2 657 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 CTAGE6Q86UF2 777 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 KLHDC8AQ8IYD2 350 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 TAGAPQ8N103 731 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 PAQR4Q8N4S7 273 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 UBL4BQ8N7F7 174 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF611Q8N823 705 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 CCDC89Q8N998 374 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 FAM47BQ8NA70 645 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 TTLQ8NG68 377 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 OR52N4Q8NGI2 321 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 CD200R1Q8TD46 325 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 EEF1AKMT1Q8WVE0 214 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 DDB2Q92466 427 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ANKRD7Q92527 254 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 NEIL2Q969S2 332 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 FBXL8Q96CD0 374 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 STARD4Q96DR4 205 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 MS4A6EQ96DS6 147 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ELP4Q96EB1 424 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 MARK4Q96L34 752 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF597Q96LX8 424 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 RUNDC3BQ96NL0 473 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 QRFPRQ96P65 431 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 FAM111AQ96PZ2 611 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 OR4K3Q96R72 315 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 SERINC2Q96SA4 455 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 TUBA1CQ9BQE3 449 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ANGPTL4Q9BY76 406 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 AICDAQ9GZX7 198 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 SPNS1Q9H2V7 528 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 UBQLN3Q9H347 655 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 HOMER3Q9NSC5 361 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 ARL15Q9NXU5 204 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 PSD3Q9NYI0 1048 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 WWOXQ9NZC7 414 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 TRMT6Q9UJA5 497 aaKnown RBP4.36□□□□□ -1.71
ATXN3-228ENST00000554592 C15orf41Q9Y2V0 281 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 KCNE2Q9Y6J6 123 aa4.36□□□□□ -1.71
ATXN3-228ENST00000554592 PHF3Q92576 2039 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms