RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 TMEM255BQ8WV15 326 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 SLC7A6Q92536 515 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 OMA1Q96E52 524 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 MCHR1Q99705 422 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 CCNB1IP1Q9NPC3 277 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 PSORS1C1Q9UIG5 152 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 DSPPQ9NZW4 1301 aa10.84□□□□□ -0.67
SHMT2-212ENST00000554467 TMEM131Q92545 1883 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 DUXAA6NLW8 204 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 SNTNA6NMZ2 147 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 SNX4O95219 450 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 CH25HO95992 272 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 PTHP01270 115 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 PTGS2P35354 604 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 FNTBP49356 437 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 SNRPD2P62316 118 aaKnown RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 CFHR1Q03591 330 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 TTLL10Q6ZVT0 673 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 KCTD20Q7Z5Y7 419 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 SLC35F3Q8IY50 421 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 SAMD14Q8IZD0 417 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 ZNF675Q8TD23 568 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 SLC38A4Q969I6 547 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 TCTN2Q96GX1 697 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 MGAT4BQ9UQ53 548 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 GPR52Q9Y2T5 361 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 GPR179Q6PRD1 2367 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 TSPAN9O75954 239 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 TP53P04637 393 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 IFNA16P05015 189 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 CKMT1AP12532 417 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 AZGP1P25311 298 aaKnown RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 ETV6P41212 452 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 SLC15A1P46059 708 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 DHPSP49366 369 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 CXCR4P61073 352 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 TAGLNQ01995 201 aaKnown RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 BAK1Q16611 211 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 ESCO2Q56NI9 601 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 KIF18BQ86Y91 864 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 TOR1AIP2Q8NFQ8 470 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 RIT1Q92963 219 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 TRMT61AQ96FX7 289 aaKnown RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 RBM18Q96H35 190 aaKnown RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 TTC28Q96AY4 2481 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 APOA1P02647 267 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 RNH1P13489 461 aaKnown RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 AFF3P51826 1226 aaKnown RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 DOC2BQ14184 412 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 ARHGAP11BQ3KRB8 267 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 MRPL2Q5T653 305 aaKnown RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 ACSM5Q6NUN0 579 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 CEP19Q96LK0 163 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 ARHGDIGQ99819 225 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 GON7Q9BXV9 100 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 PIGUQ9H490 435 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 MTHFD2LQ9H903 347 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-212ENST00000554467 NTMQ9P121 344 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 SLC7A7Q9UM01 511 aa10.83□□□□□ -0.68
SHMT2-212ENST00000554467 CLCA1A8K7I4 914 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 TMEM150CB9EJG8 249 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 TLX2O43763 284 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-212ENST00000554467 PLOD3O60568 738 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 SLITRK5O94991 958 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 MXD1Q05195 221 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 GINS1Q14691 196 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 LAMTOR1Q6IAA8 161 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 WDR36Q8NI36 951 aaKnown RBP10.82□□□□□ -0.68
SHMT2-212ENST00000554467 DIO2Q92813 273 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 MYDGFQ969H8 173 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 OR5M11Q96RB7 305 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 LMF1Q96S06 567 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 PDE7BQ9NP56 450 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 TIGARQ9NQ88 270 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 KLHL28Q9NXS3 571 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 CALML5Q9NZT1 146 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 HYAL3O43820 417 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-212ENST00000554467 PRKYO43930 277 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 DEFA1P59665 94 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 DEFA3P59666 94 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 FAPQ12884 760 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 TSTQ16762 297 aaKnown RBP10.82□□□□□ -0.68
SHMT2-212ENST00000554467 MANEAQ5SRI9 462 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 C1orf189Q5VU69 101 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 RRM2BQ7LG56 351 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 GDF7Q7Z4P5 450 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 TMEM151BQ8IW70 566 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 NRMQ8IXM6 262 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 OR51Q1Q8NH59 317 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 ZFAND1Q8TCF1 268 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 AIFM2Q9BRQ8 373 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 PRTFDC1Q9NRG1 225 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 ERVK-19Q9WJR5 959 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 GRIP1Q9Y3R0 1128 aa10.82□□□□□ -0.68
SHMT2-212ENST00000554467 LILRA5A6NI73 299 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 STX11O75558 287 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 IGKV1D-16P01601 117 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 GABRA4P48169 554 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 ARL4DP49703 201 aa10.81□□□□□ -0.68
SHMT2-212ENST00000554467 SMIM11AP58511 58 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms