RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 FBXL19-AS1Q494R0 122 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 FLYWCH1Q4VC44 716 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 SAXO2Q658L1 398 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 PGM2L1Q6PCE3 622 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 C16orf89Q6UX73 402 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 SNX32Q86XE0 403 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 GTPBP8Q8N3Z3 284 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-211ENST00000554310 TRIML2Q8N7C3 387 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 C9orf106Q8NAJ2 232 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 CHDHQ8NE62 594 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-211ENST00000554310 ZBTB8AQ96BR9 441 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 NEURL3Q96EH8 262 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 C14orf79Q96F83 325 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 LRRC46Q96FV0 321 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 TEX37Q96LM6 180 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 SFXN3Q9BWM7 321 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 EXD2Q9NVH0 621 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 SLC7A8Q9UHI5 535 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 PRPF19Q9UMS4 504 aaKnown RBP11.8□□□□□ -0.52
SHMT2-211ENST00000554310 VDAC3Q9Y277 283 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 KCNE3Q9Y6H6 103 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 MED12LQ86YW9 2145 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 TACC2O95359 2948 aa11.8□□□□□ -0.52
SHMT2-211ENST00000554310 CCDC168Q8NDH2 2452 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 LOC100653049A0A140TA62 436 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 NPIPB9F8W1W9 429 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 H3BML4 177 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 UBDO15205 165 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 GMFGO60234 142 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 ENTPD5O75356 428 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 KRT34O76011 436 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 GUSBP08236 651 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 TMIGD3P0DMS9 266 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-211ENST00000554310 CTSSP25774 331 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 CHI3L1P36222 383 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-211ENST00000554310 KHKP50053 298 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 ATP12AP54707 1039 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 SUMO3P55854 103 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-211ENST00000554310 TXNL4AP83876 142 aaKnown RBP11.79□□□□□ -0.52
SHMT2-211ENST00000554310 KLHL26Q53HC5 615 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 HEPHL1Q6MZM0 1159 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 POMZP3Q6PJE2 187 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 ARSKQ6UWY0 536 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 CHMP1BQ7LBR1 199 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 C16orf62Q7Z3J2 963 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 GRAMD2AQ8IUY3 354 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 DMRTC2Q8IXT2 367 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-211ENST00000554310 UBQLNLQ8IYU4 475 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 CLEC4FQ8N1N0 589 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 B4GALNT2Q8NHY0 566 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 WDR60Q8WVS4 1066 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 OIT3Q8WWZ8 545 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 SH3YL1Q96HL8 342 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-211ENST00000554310 PANX1Q96RD7 426 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 SDF2Q99470 211 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 SLC35A5Q9BS91 424 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 ZNF350Q9GZX5 532 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 OR51I1Q9H343 314 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 POLE3Q9NRF9 147 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 SDR39U1Q9NRG7 319 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-211ENST00000554310 ZIM2Q9NZV7 527 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 STOML1Q9UBI4 398 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 FOXD3Q9UJU5 478 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-211ENST00000554310 ZNF337Q9Y3M9 751 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 AP4B1Q9Y6B7 739 aa11.79□□□□□ -0.52
SHMT2-211ENST00000554310 NPIPA5A0A0B4J1W7 369 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 SLC22A20A6NK97 555 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 C9JVG2 144 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 NPIPA7E9PJI5 369 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 SEC14L5O43304 696 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 KIAA0513O60268 411 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 STX11O75558 287 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 SLC22A3O75751 556 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 RCBTB2O95199 551 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 IL6P05231 212 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 NPIPA8P0DM63 369 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 IL12AP29459 219 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 EIF1P41567 113 aaKnown RBP11.78□□□□□ -0.52
SHMT2-211ENST00000554310 ANXA11P50995 505 aaKnown RBP11.78□□□□□ -0.52
SHMT2-211ENST00000554310 ACTR3P61158 418 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 RPS3AP61247 264 aaKnown RBP11.78□□□□□ -0.52
SHMT2-211ENST00000554310 EEF1A1P68104 462 aaKnown RBP11.78□□□□□ -0.52
SHMT2-211ENST00000554310 ZNF117Q03924 483 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 PLPPR5Q32ZL2 321 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 ARHGAP11BQ3KRB8 267 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.78□□□□□ -0.52
SHMT2-211ENST00000554310 ATAD3BQ5T9A4 648 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 EEF1A1P5Q5VTE0 462 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 OR2A2Q6IF42 318 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 MSANTD1Q6ZTZ1 278 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 LURAP1LQ8IV03 231 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 DEFB107AQ8IZN7 70 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 ZNF295-AS1Q8N0V1 137 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 OR5M1Q8NGP8 315 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 PHOSPHO1Q8TCT1 267 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 STMN2Q93045 179 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 RNASE6Q93091 150 aaKnown RBP11.78□□□□□ -0.52
SHMT2-211ENST00000554310 MARK4Q96L34 752 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 OR52E6Q96RD3 313 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 EFCAB1Q9HAE3 211 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms