RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ARSGQ96EG1 525 aa11.13□□□□□ -0.63
SHMT2-209ENST00000553949 C1GALT1C1Q96EU7 318 aa11.13□□□□□ -0.63
SHMT2-209ENST00000553949 KLHDC3Q9BQ90 382 aa11.13□□□□□ -0.63
SHMT2-209ENST00000553949 MMADHCQ9H3L0 296 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-209ENST00000553949 MUC13Q9H3R2 512 aa11.13□□□□□ -0.63
SHMT2-209ENST00000553949 ZDHHC11Q9H8X9 412 aa11.13□□□□□ -0.63
SHMT2-209ENST00000553949 ADPRHL2Q9NX46 363 aa11.13□□□□□ -0.63
SHMT2-209ENST00000553949 QPCTLQ9NXS2 382 aa11.13□□□□□ -0.63
SHMT2-209ENST00000553949 KLHL28Q9NXS3 571 aa11.13□□□□□ -0.63
SHMT2-209ENST00000553949 DKKL1Q9UK85 242 aa11.13□□□□□ -0.63
SHMT2-209ENST00000553949 ATRXP46100 2492 aa11.13□□□□□ -0.63
SHMT2-209ENST00000553949 CFAP73A6NFT4 308 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 TMEM229AB2RXF0 380 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 NPIPA5E9PKD4 350 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 SYT5O00445 386 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 AP3D1O14617 1153 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 SUV39H1O43463 412 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 FRS3O43559 492 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 CDC40O60508 579 aaKnown RBP eCLIP11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ADAM11O75078 769 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ZNF682O95780 498 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 NUDT14O95848 222 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 LGI1O95970 557 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 FESP07332 822 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 C8BP07358 591 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 CELA3AP09093 270 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 GKN3PP0CG01 181 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 MST1P26927 711 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 DPP4P27487 766 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 SRD5A2P31213 254 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 RYKP34925 604 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 SLC6A8P48029 635 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 SELENOWP63302 87 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 MS4A2Q01362 244 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 CBFBQ13951 182 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 SLC10A1Q14973 349 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ZSCAN26Q16670 478 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 SOWAHCQ53LP3 525 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ZNF324BQ6AW86 544 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ARSKQ6UWY0 536 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 CBLL1Q75N03 491 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ZNF550Q7Z398 422 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 DHFR2Q86XF0 187 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ZNF440Q8IYI8 595 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 EID3Q8N140 333 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 GPR119Q8TDV5 335 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 FAR1Q8WVX9 515 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 LZICQ8WZA0 190 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 PROX1Q92786 737 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ASB9Q96DX5 294 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 DTNBP1Q96EV8 351 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 TPD52L3Q96J77 140 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 NSMCE2Q96MF7 247 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 RNF145Q96MT1 663 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ARHGDIGQ99819 225 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 OR2B2Q9GZK3 357 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 DEFB127Q9H1M4 99 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 TSPAN10Q9H1Z9 355 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-209ENST00000553949 DCAF13Q9NV06 445 aaKnown RBP11.12□□□□□ -0.63
SHMT2-209ENST00000553949 OLAHQ9NV23 265 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 MED17Q9NVC6 651 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ASF1BQ9NVP2 202 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 TAS2R10Q9NYW0 307 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 ACTR3BQ9P1U1 418 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 BAG5Q9UL15 447 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 NPIPA1Q9UND3 350 aa11.12□□□□□ -0.63
SHMT2-209ENST00000553949 A0A087WZY1 265 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 FAM47E-STBD1D6RA91 191 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 M0R3H8 397 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 ACOT8O14734 319 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 ZIC3O60481 467 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 LINGO3P0C6S8 592 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 PRG2P13727 222 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 UQCRBP14927 111 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 HK1P19367 917 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 PGCP20142 388 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 ATP6V1B2P21281 511 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 TCEA1P23193 301 aaKnown RBP11.11□□□□□ -0.63
SHMT2-209ENST00000553949 ZNF41P51814 821 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-209ENST00000553949 MLLT10P55197 1068 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 EPS8Q12929 822 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 TRAP1Q12931 704 aaKnown RBP11.11□□□□□ -0.63
SHMT2-209ENST00000553949 QPRTQ15274 297 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 TOMM34Q15785 309 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-209ENST00000553949 PLPPR5Q32ZL2 321 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 CMPK2Q5EBM0 449 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 LCN8Q6JVE9 175 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 CYP2R1Q6VVX0 501 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 YRDCQ86U90 279 aaKnown RBP11.11□□□□□ -0.63
SHMT2-209ENST00000553949 SPPL2CQ8IUH8 684 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 FAM83FQ8NEG4 500 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-209ENST00000553949 OR52E4Q8NGH9 312 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 OR10Q1Q8NGQ4 319 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 OR14L1PQ8NHC6 308 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 NR4A3Q92570 626 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 ZNF524Q96C55 264 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 BARD1Q99728 777 aaKnown RBP11.11□□□□□ -0.63
SHMT2-209ENST00000553949 WFDC6Q9BQY6 131 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 EVA1AQ9H8M9 152 aa11.11□□□□□ -0.63
SHMT2-209ENST00000553949 ACKR4Q9NPB9 350 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms