RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 FAM71CQ8NEG0 241 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 BHLHE22Q8NFJ8 381 aaPredicted RBP12.56□□□□□ -0.4
TUBB3-202ENST00000553656 FAM57AQ8TBR7 257 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 SLC26A7Q8TE54 656 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 TMEM234Q8WY98 164 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 ABTB1Q969K4 478 aaPredicted RBP12.56□□□□□ -0.4
TUBB3-202ENST00000553656 NSL1Q96IY1 281 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 EXOSC3Q9NQT5 275 aaKnown RBP12.56□□□□□ -0.4
TUBB3-202ENST00000553656 ADA2Q9NZK5 511 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 SPRR3Q9UBC9 169 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 STOML1Q9UBI4 398 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 ICAM5Q9UMF0 924 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 SMG1Q96Q15 3661 aaKnown RBP12.56□□□□□ -0.4
TUBB3-202ENST00000553656 SVILO95425 2214 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 CDHR4A6H8M9 788 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 CCT8L1PA6NM43 557 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 FIGNL2A6NMB9 653 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 B4DXG7 233 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 LINC01387J3KSC0 135 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 GSTA4O15217 222 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 ZIC3O60481 467 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 DNAJA2O60884 412 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF17P17021 662 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 POU3F2P20265 443 aaPredicted RBP12.55□□□□□ -0.4
TUBB3-202ENST00000553656 CALB2P22676 271 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 CHMP24386 653 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 PRKAR1BP31321 381 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 RYKP34925 604 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 LIPEQ05469 1076 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 QPRTQ15274 297 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 PLPPR5Q32ZL2 321 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 NHSL2Q5HYW2 709 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 C8orf82Q6P1X6 216 aaPredicted RBP12.55□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF550Q7Z398 422 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 CD163Q86VB7 1156 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 CALHM3Q86XJ0 350 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 PM20D2Q8IYS1 436 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 PGAM4Q8N0Y7 254 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 TNIP2Q8NFZ5 429 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF563Q8TA94 476 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 CNOT9Q92600 299 aaKnown RBP12.55□□□□□ -0.4
TUBB3-202ENST00000553656 ARSGQ96EG1 525 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 ALG2Q9H553 416 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 CMTM6Q9NX76 183 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 KLHL28Q9NXS3 571 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 TNFRSF10DQ9UBN6 386 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 SH3BGRL2Q9UJC5 107 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF835Q9Y2P0 537 aa12.55□□□□□ -0.4
TUBB3-202ENST00000553656 GPC6Q9Y625 555 aaPredicted RBP12.55□□□□□ -0.4
TUBB3-202ENST00000553656 NCKAP5O14513 1909 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 A0A1B0GUH1 482 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 ELOVL7A1L3X0 281 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 OR2M5A3KFT3 312 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 C7orf72A4D263 438 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 CFAP73A6NFT4 308 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 H3BML4 177 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 NME4O00746 187 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 ZNHIT1O43257 154 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 IFNA14P01570 189 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 STSP08842 583 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 LINGO3P0C6S8 592 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 BMP7P18075 431 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 ME2P23368 584 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 GZMMP51124 257 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 PCBP3P57721 371 aaKnown RBP12.54□□□□□ -0.4
TUBB3-202ENST00000553656 EEFSECP57772 596 aaKnown RBP12.54□□□□□ -0.4
TUBB3-202ENST00000553656 EEF1A1P68104 462 aaKnown RBP12.54□□□□□ -0.4
TUBB3-202ENST00000553656 CRYZQ08257 329 aaKnown RBP12.54□□□□□ -0.4
TUBB3-202ENST00000553656 VEZF1Q14119 521 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 SF3B4Q15427 424 aaKnown RBP eCLIP12.54□□□□□ -0.47e-7■■■■□ 24
TUBB3-202ENST00000553656 C1QL3Q5VWW1 255 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF585AQ6P3V2 769 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 Q6ZPB1 254 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-202ENST00000553656 FGD2Q7Z6J4 655 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 CHERPQ8IWX8 916 aaKnown RBP12.54□□□□□ -0.4
TUBB3-202ENST00000553656 MICU2Q8IYU8 434 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 GTPBP8Q8N3Z3 284 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-202ENST00000553656 OR5M9Q8NGP3 310 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 OR5M1Q8NGP8 315 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 GPR119Q8TDV5 335 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 RASSF5Q8WWW0 418 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 ST8SIA1Q92185 356 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 MRGPRX4Q96LA9 322 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF583Q96ND8 569 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 KCTD14Q9BQ13 255 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-202ENST00000553656 UGT2B28Q9BY64 529 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 TP63Q9H3D4 680 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-202ENST00000553656 RLIMQ9NVW2 624 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 DNAJB12Q9NXW2 375 aaKnown RBP12.54□□□□□ -0.4
TUBB3-202ENST00000553656 ALKBH4Q9NXW9 302 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 TINAGQ9UJW2 476 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 CAMK2AQ9UQM7 478 aa12.54□□□□□ -0.4
TUBB3-202ENST00000553656 B2RBV5 119 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 H0Y3Z8 333 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 M0QX08 132 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 WDR1O75083 606 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 BCAS1O75363 584 aaPredicted RBP12.53□□□□□ -0.4
TUBB3-202ENST00000553656 GMNNO75496 209 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 PEPDP12955 493 aa12.53□□□□□ -0.4
TUBB3-202ENST00000553656 GP1BBP13224 206 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms