RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	PLLP	Q9Y342	182 aa		5.07	□□□□□ -1.6
RACGAP1-223	ENST00000551260	MAD1L1	Q9Y6D9	718 aa		5.07	□□□□□ -1.6
RACGAP1-223	ENST00000551260		A0A1B0GUS0	222 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	RBMY1B	A6NDE4	496 aa	Known RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	RBMY1E	A6NEQ0	496 aa	Known RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ERI2	A8K979	691 aa	Known RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260		B9A039	149 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CLDN34	H7C241	214 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CCDC188	H7C350	402 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	hCG_2039718	K7EN88	272 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CLGN	O14967	610 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ACOX3	O15254	700 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	TMPRSS11D	O60235	418 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	NGF	P01138	241 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	YES1	P07947	543 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	RBMY1D	P0C7P1	496 aa	Known RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	NR2F6	P10588	404 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	GNAZ	P19086	355 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	DRD5	P21918	477 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ENPP1	P22413	925 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	IL12B	P29460	328 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	EVI2B	P34910	448 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	SFTPD	P35247	375 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	RGS4	P49798	205 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	EMD	P50402	254 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	AP1S2	P56377	157 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CARD18	P57730	90 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	LINC00310	P59036	64 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	SRSF3	P84103	164 aa	Known RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	SLC18A3	Q16572	532 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	C2orf68	Q2NKX9	166 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	DPY19L1	Q2PZI1	675 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	FBXO48	Q5FWF7	155 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ARL13A	Q5H913	290 aa	Predicted RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ZNF311	Q5JNZ3	666 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	RBM20	Q5T481	1227 aa	Known RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CASC10	Q5T4H9	136 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	C9orf135	Q5VTT2	229 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	GTF2IRD2B	Q6EKJ0	949 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	OR4C11	Q6IEV9	310 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ACSM5	Q6NUN0	579 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	SYT10	Q6XYQ8	523 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	LCNL1	Q6ZST4	164 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ZNF771	Q7L3S4	317 aa	Predicted RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	FCRLA	Q7L513	359 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	MARCH3	Q86UD3	253 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	GTF2IRD2	Q86UP8	949 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	WDR75	Q8IWA0	830 aa	Known RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CDK20	Q8IZL9	346 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	TRIM58	Q8NG06	486 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	OR7G1	Q8NGA0	311 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	OR52R1	Q8NGF1	315 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	DUSP19	Q8WTR2	217 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ZNF473	Q8WTR7	871 aa	Known RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	SLC9A6	Q92581	669 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	YIPF5	Q969M3	257 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	KIFC1	Q9BW19	673 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ROGDI	Q9GZN7	287 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CA10	Q9NS85	328 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	LYAR	Q9NX58	379 aa	Known RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	TES	Q9UGI8	421 aa	Known RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	PHF11	Q9UIL8	331 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	FBXO9	Q9UK97	447 aa	Predicted RBP	5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	UTS2R	Q9UKP6	389 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ASB4	Q9Y574	426 aa		5.06	□□□□□ -1.6
RACGAP1-223	ENST00000551260	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	5.06	□□□□□ -1.6	2e-8	■□□□□ 8.4
RACGAP1-223	ENST00000551260	IGHV3OR16-10	A0A075B7F0	116 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	KRTAP4-8	A0A0G2JLE6	195 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	TCRBV7S2A1N4T	A0A589	114 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	TMEM129	A0AVI4	362 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	C5orf63	A6NC05	138 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260		B2RBV5	119 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260		H0YL77	283 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	C3orf84	H3BNL1	204 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260		J3QLI3	93 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	PLPP1	O14494	284 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	T	O15178	435 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	DHH	O43323	396 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	HOXA3	O43365	443 aa	Predicted RBP	5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	PPIH	O43447	177 aa	Known RBP	5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	PIP5K1C	O60331	668 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	FADS1	O60427	444 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	PRKD3	O94806	890 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	OPN1MW	P04001	364 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	GBA	P04062	536 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ADRA2A	P08913	450 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	ZSCAN5DP	P0CG00	497 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CTAGE8	P0CG41	777 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CT45A8	P0DMV1	189 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CT45A9	P0DMV2	189 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	OPN1MW2	P0DN77	364 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	OPN1MW3	P0DN78	364 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	PCNA	P12004	261 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	CPM	P14384	443 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	TCN1	P20061	433 aa	Predicted RBP	5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	PSMA4	P25789	261 aa	Known RBP	5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	PIK3R1	P27986	724 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	GSTM2	P28161	218 aa		5.05	□□□□□ -1.6
RACGAP1-223	ENST00000551260	HPD	P32754	393 aa	Predicted RBP	5.05	□□□□□ -1.6

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