RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 UBXN6Q9BZV1 441 aa3.83□□□□□ -1.8
LIMA1-205ENST00000550592 ZBP1Q9H171 429 aa3.83□□□□□ -1.8
LIMA1-205ENST00000550592 DPH5Q9H2P9 285 aa3.83□□□□□ -1.8
LIMA1-205ENST00000550592 LPAR2Q9HBW0 351 aa3.83□□□□□ -1.8
LIMA1-205ENST00000550592 DCAF13Q9NV06 445 aaKnown RBP3.83□□□□□ -1.8
LIMA1-205ENST00000550592 ZNF581Q9P0T4 197 aa3.83□□□□□ -1.8
LIMA1-205ENST00000550592 ATP6V1HQ9UI12 483 aa3.83□□□□□ -1.8
LIMA1-205ENST00000550592 CHD7Q9P2D1 2997 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 CHD9Q3L8U1 2897 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 HELZ2Q9BYK8 2649 aaKnown RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 OTOGLQ3ZCN5 2332 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 SRRM5B3KS81 715 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 WASH3PC4AMC7 463 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 CRLF1O75462 422 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 VENTXO95231 258 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 IFNB1P01574 187 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 HEXBP07686 556 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 ANXA4P09525 319 aaPredicted RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 WNT2P09544 360 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 FOLR2P14207 255 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 CYP2F1P24903 491 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 HTR5AP47898 357 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 STK19P49842 368 aaPredicted RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 CSRP3P50461 194 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 IRX3P78415 501 aaPredicted RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 ZFP36L1Q07352 338 aaKnown RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 COX10Q12887 443 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 EXOSC2Q13868 293 aaKnown RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 EIF2B1Q14232 305 aaKnown RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 ABRAXAS2Q15018 415 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 LTB4RQ15722 352 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 DNAJC21Q5F1R6 531 aaKnown RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 MS4A13Q5J8X5 152 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 AFTPHQ6ULP2 937 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 WASH2PQ6VEQ5 465 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 HACD2Q6Y1H2 254 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 LPCAT2Q7L5N7 544 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 LHFPL4Q7Z7J7 247 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 CBWD2Q8IUF1 395 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 GCNT2Q8N0V5 402 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 TRPV1Q8NER1 839 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 DNAJA3Q96EY1 480 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 VSTM2LQ96N03 204 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 GPA33Q99795 319 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 THUMPD2Q9BTF0 503 aaKnown RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 MRPL13Q9BYD1 178 aaKnown RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 COQ10BQ9H8M1 238 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 COG4Q9H9E3 785 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 DUS2Q9NX74 493 aaKnown RBP3.82□□□□□ -1.8
LIMA1-205ENST00000550592 CSAG2Q9Y5P2 127 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 MYO18BQ8IUG5 2567 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 PTPN13Q12923 2485 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 FER1L5A0AVI2 2057 aa3.82□□□□□ -1.8
LIMA1-205ENST00000550592 ARAP2Q8WZ64 1704 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 GRIN2DO15399 1336 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 TRBV7-9A0A0J9YWB2 115 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 ZNF487B1APH4 448 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 C11orf98E9PRG8 122 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 MBTPS2O43462 519 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 KRT6BP04259 564 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 THRBP10828 461 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 NCF1P14598 390 aaPredicted RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 GATA1P15976 413 aaPredicted RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 PAICSP22234 425 aaKnown RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 IGFBP5P24593 272 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 HPDP32754 393 aaPredicted RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 ACAA2P42765 397 aaKnown RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 PTGFRP43088 359 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 KRT6CP48668 564 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 POU3F4P49335 361 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 METAP1P53582 386 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 CCNA1P78396 465 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 ZIC1Q15915 447 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 CNPY1Q3B7I2 92 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 DCAF4L1Q3SXM0 396 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 CYBRD1Q53TN4 286 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 SLC39A4Q6P5W5 647 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 LRRC8BQ6P9F7 803 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 CCBE1Q6UXH8 406 aaPredicted RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 HIPK1Q86Z02 1210 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 TMEM105Q8N8V8 129 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 OR6T1Q8NGN1 323 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 TBCKQ8TEA7 893 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 FAM222BQ8WU58 562 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 FAM151AQ8WW52 585 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 ART4Q93070 314 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 C11orf24Q96F05 449 aaPredicted RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 PIWIL1Q96J94 861 aaKnown RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 C1orf147Q96MC9 270 aaPredicted RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 C9orf85Q96MD7 179 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 TGS1Q96RS0 853 aaKnown RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 PUS3Q9BZE2 481 aaKnown RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 CLEC5AQ9NY25 188 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 SENP1Q9P0U3 644 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 EXOSC1Q9Y3B2 195 aaKnown RBP3.81□□□□□ -1.8
LIMA1-205ENST00000550592 MFHAS1Q9Y4C4 1052 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 DNAH14Q0VDD8 3507 aa3.81□□□□□ -1.8
LIMA1-205ENST00000550592 ELP1O95163 1332 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 A0A1B0GWJ7 208 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 TRABD2BA6NFA1 517 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms