RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 UROSP10746 265 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 EDNRAP25101 427 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 ELK4P28324 431 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 EIF1P41567 113 aaKnown RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 TOMM34Q15785 309 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 NDUFAF6Q330K2 333 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 Q6ZSR9 355 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 FCRLAQ7L513 359 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 HIPK1Q86Z02 1210 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 FBXO27Q8NI29 283 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 PIWIL2Q8TC59 973 aaKnown RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 PHOSPHO1Q8TCT1 267 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 HSD17B8Q92506 261 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 CDS1Q92903 461 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 FAM120BQ96EK7 910 aaKnown RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 REXO5Q96IC2 774 aaKnown RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 C16orf45Q96MC5 204 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 CCT7Q99832 543 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 BTBD2Q9BX70 525 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 POTEKPQ9BYX7 375 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 TRIM2Q9C040 744 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 C12orf65Q9H3J6 166 aaKnown RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 TUBB1Q9H4B7 451 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 YAE1D1Q9NRH1 226 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 SIRT3Q9NTG7 399 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 ACSS1Q9NUB1 689 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 GIN1Q9NXP7 522 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 PSMC3IPQ9P2W1 217 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 DCDC2Q9UHG0 476 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 BAIAP2L1Q9UHR4 511 aa11.16□□□□□ -0.62
LETMD1-222ENST00000550274 ING1Q9UK53 422 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-222ENST00000550274 H3BQF6 201 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 ZNF195O14628 629 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 TLX2O43763 284 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 GLRA3O75311 464 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 PRKD3O94806 890 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 NUDT14O95848 222 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 TP53P04637 393 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 HMGN2P05204 90 aaKnown RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 YES1P07947 543 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 PTNP21246 168 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 ENPP1P22413 925 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 LCN1P31025 176 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 SERPINB4P48594 390 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 RPL38P63173 70 aaKnown RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 POU6F2P78424 691 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 ITGADQ13349 1161 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 LASP1Q14847 261 aaKnown RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 TMEM176BQ3YBM2 270 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 RFTN2Q52LD8 501 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 CFAP157Q5JU67 520 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 ZCCHC12Q6PEW1 402 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 DNAJC14Q6Y2X3 702 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 TRMT10CQ7L0Y3 403 aaKnown RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 BHLHA15Q7RTS1 189 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 TDRPQ86YL5 185 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 ATP6V1C2Q8NEY4 427 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 ZFP90Q8TF47 636 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 NANOS1Q8WY41 292 aaKnown RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 TRAF4Q9BUZ4 470 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 CXorf36Q9H7Y0 433 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 GP6Q9HCN6 339 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 NGBQ9NPG2 151 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 TIGARQ9NQ88 270 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 ZCCHC3Q9NUD5 404 aaKnown RBP11.15□□□□□ -0.62
LETMD1-222ENST00000550274 PRSS50Q9UI38 385 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 ICAM5Q9UMF0 924 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 CARD8Q9Y2G2 431 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 FIS1Q9Y3D6 152 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 SNX8Q9Y5X2 465 aa11.15□□□□□ -0.62
LETMD1-222ENST00000550274 A0A1W2PNR3 127 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 SHISA9B4DS77 424 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 SLC28A1O00337 649 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 RGS14O43566 566 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 GPRIN2O60269 458 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 PLIN3O60664 434 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 LYZL6O75951 148 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 FAM153BP0C7A2 387 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 PRKCAP17252 672 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 P2RX1P51575 399 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 C21orf58P58505 322 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 DNAJB13P59910 316 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 NAA20P61599 178 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 P2RY6Q15077 328 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 STK11Q15831 433 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 FAM153CQ494X1 144 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 KLHL26Q53HC5 615 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 DMRTA1Q5VZB9 504 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 PODNL1Q6PEZ8 512 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 LRIG3Q6UXM1 1119 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 Q6ZT83 130 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.14□□□□□ -0.63
LETMD1-222ENST00000550274 MTERF4Q7Z6M4 381 aaKnown RBP11.14□□□□□ -0.63
LETMD1-222ENST00000550274 DTX2Q86UW9 622 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 CHMP6Q96FZ7 201 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 STACQ99469 402 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 PSD2Q9BQI7 771 aa11.14□□□□□ -0.63
LETMD1-222ENST00000550274 IQCGQ9H095 443 aaKnown RBP11.14□□□□□ -0.63
LETMD1-222ENST00000550274 PIGUQ9H490 435 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms