RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 AKTIPQ9H8T0 292 aa12□□□□□ -0.49
GCN1-206ENST00000549815 SSU72Q9NP77 194 aaKnown RBP12□□□□□ -0.49
GCN1-206ENST00000549815 NOP53Q9NZM5 478 aaKnown RBP12□□□□□ -0.49
GCN1-206ENST00000549815 NOL12Q9UGY1 213 aaKnown RBP eCLIP12□□□□□ -0.49
GCN1-206ENST00000549815 KCNE5Q9UJ90 142 aa12□□□□□ -0.49
GCN1-206ENST00000549815 FAF1Q9UNN5 650 aaPredicted RBP12□□□□□ -0.49
GCN1-206ENST00000549815 DTNAQ9Y4J8 743 aa12□□□□□ -0.49
GCN1-206ENST00000549815 V9GYY5 206 aaPredicted RBP12□□□□□ -0.49
GCN1-206ENST00000549815 PRR14LQ5THK1 2151 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 WDR91A4D1P6 747 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 ZNF195O14628 629 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 BIRC5O15392 142 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 KLF4O43474 513 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 DNAJA2O60884 412 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 SYNGR4O95473 234 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 PLGP00747 810 aaPredicted RBP11.99□□□□□ -0.49
GCN1-206ENST00000549815 TUBBP07437 444 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 HOXB4P17483 251 aaPredicted RBP11.99□□□□□ -0.49
GCN1-206ENST00000549815 ME2P23368 584 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 AGTR1P30556 359 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 CTBP2P56545 445 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 ABCE1P61221 599 aaKnown RBP11.99□□□□□ -0.49
GCN1-206ENST00000549815 RPS26P62854 115 aaKnown RBP11.99□□□□□ -0.49
GCN1-206ENST00000549815 PHC1P78364 1004 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 MPP2Q14168 576 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 CHI3L2Q15782 390 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 PDCD2Q16342 344 aaPredicted RBP11.99□□□□□ -0.49
GCN1-206ENST00000549815 ACKR1Q16570 336 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 ZNF239Q16600 458 aaKnown RBP11.99□□□□□ -0.49
GCN1-206ENST00000549815 EXOC3L2Q2M3D2 409 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 KRT71Q3SY84 523 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 PDSS1Q5T2R2 415 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 OR4F3Q6IEY1 312 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 PPP4R4Q6NUP7 873 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 C6orf120Q7Z4R8 191 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 ZNF527Q8NB42 609 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 OR8J2Q8NGG1 315 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 RNF128Q8TEB7 428 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 ROBO4Q8WZ75 1007 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 ARSGQ96EG1 525 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 ZC3HAV1LQ96H79 300 aaKnown RBP11.99□□□□□ -0.49
GCN1-206ENST00000549815 KLHL4Q9C0H6 718 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 HAO1Q9UJM8 370 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.99□□□□□ -0.49
GCN1-206ENST00000549815 RAP2CQ9Y3L5 183 aa11.99□□□□□ -0.49
GCN1-206ENST00000549815 GPC6Q9Y625 555 aaPredicted RBP11.99□□□□□ -0.49
GCN1-206ENST00000549815 FREM1Q5H8C1 2179 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 CENPVL1A0A0U1RR11 272 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 H3BNH8 94 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 RNASET2O00584 256 aaKnown RBP11.98□□□□□ -0.49
GCN1-206ENST00000549815 ANKRD28O15084 1053 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 CFLARO15519 480 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 EIF4E2O60573 245 aaKnown RBP11.98□□□□□ -0.49
GCN1-206ENST00000549815 PPP3CBP16298 524 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 MATN1P21941 496 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 SFTPDP35247 375 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 SOAT1P35610 550 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 CARD18P57730 90 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 NKX6-1P78426 367 aaPredicted RBP11.98□□□□□ -0.49
GCN1-206ENST00000549815 ZNF141Q15928 474 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 PGS1Q32NB8 556 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 HEPHL1Q6MZM0 1159 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 BEND4Q6ZU67 534 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 OLIG3Q7RTU3 272 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 LRRC75A-AS1Q8N1F1 130 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 CLEC4FQ8N1N0 589 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 PPP1R14CQ8TAE6 165 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 ABHD3Q8WU67 409 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 IGFBPL1Q8WX77 278 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 CPNE4Q96A23 557 aaPredicted RBP11.98□□□□□ -0.49
GCN1-206ENST00000549815 MRGPRX4Q96LA9 322 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 PPP1R36Q96LQ0 422 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 PARD6BQ9BYG5 372 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 NMUR2Q9GZQ4 415 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 ANK3Q12955 4377 aaKnown RBP11.98□□□□□ -0.49
GCN1-206ENST00000549815 ROS1P08922 2347 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 ARID1AO14497 2285 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 DSCAMO60469 2012 aa11.98□□□□□ -0.49
GCN1-206ENST00000549815 RNF103-CHMP3A0A140T963 221 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.97□□□□□ -0.49
GCN1-206ENST00000549815 SERINC4A6NH21 518 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 TM9SF1O15321 606 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 RGS16O15492 202 aaPredicted RBP11.97□□□□□ -0.49
GCN1-206ENST00000549815 ZNF264O43296 627 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 FCMRO60667 390 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 GCM2O75603 506 aaPredicted RBP11.97□□□□□ -0.49
GCN1-206ENST00000549815 UGT2B17O75795 530 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 AK1P00568 194 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 MYZAPP0CAP1 466 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 ARHGAP11BQ3KRB8 267 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 PDZK1Q5T2W1 519 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 SHEQ5VZ18 495 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 AP1ARQ63HQ0 302 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 GTF2IRD2BQ6EKJ0 949 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 BHLHB9Q6PI77 547 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 NUFIP2Q7Z417 695 aaKnown RBP11.97□□□□□ -0.49
GCN1-206ENST00000549815 GTF2IRD2Q86UP8 949 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 TUSC5Q8IXB3 177 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 LRRC34Q8IZ02 419 aa11.97□□□□□ -0.49
GCN1-206ENST00000549815 OR5W2Q8NH69 310 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms