RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CCL11P51671 97 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 ZNF117Q03924 483 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 PIN1Q13526 163 aaPredicted RBP15.89■□□□□ 0.13
LETMD1-220ENST00000549686 TUBA3CQ13748 450 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 CBFBQ13951 182 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 TRAM2Q15035 370 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 SWT1Q5T5J6 900 aaKnown RBP15.89■□□□□ 0.13
LETMD1-220ENST00000549686 ZNF468Q5VIY5 522 aaPredicted RBP15.89■□□□□ 0.13
LETMD1-220ENST00000549686 TUBA3EQ6PEY2 450 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 SHQ1Q6PI26 577 aaKnown RBP15.89■□□□□ 0.13
LETMD1-220ENST00000549686 LINC00471Q8N535 108 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 ICA1LQ8NDH6 482 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 DUSP19Q8WTR2 217 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 DNAJA4Q8WW22 397 aaPredicted RBP15.89■□□□□ 0.13
LETMD1-220ENST00000549686 EME1Q96AY2 570 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 NTNG2Q96CW9 530 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 VCXQ9H320 206 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 ZNF552Q9H707 407 aaPredicted RBP15.89■□□□□ 0.13
LETMD1-220ENST00000549686 ACER3Q9NUN7 267 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 SELENONQ9NZV5 590 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 RPS6KB2Q9UBS0 482 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 TMCC3Q9ULS5 477 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 ICAM5Q9UMF0 924 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 TESMINQ9Y4I5 508 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 LYVE1Q9Y5Y7 322 aa15.89■□□□□ 0.13
LETMD1-220ENST00000549686 OR5H15A6NDH6 313 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 A6NL46 340 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 CPSF4LA6NMK7 179 aaKnown RBP15.88■□□□□ 0.13
LETMD1-220ENST00000549686 G3V2T6 193 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 J3KTA2 159 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 FFAR1O14842 300 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 PEX1O43933 1283 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 SEMA7AO75326 666 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 WDPCPO95876 746 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 CCL3P10147 92 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 PRG2P13727 222 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 ZNF23P17027 643 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 CD96P40200 585 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 PTDSS1P48651 473 aaKnown RBP15.88■□□□□ 0.13
LETMD1-220ENST00000549686 CCR4P51679 360 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 CDH12P55289 794 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 TMPRSS3P57727 454 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 TLE3Q04726 772 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 OR1Q1Q15612 314 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 OGFRL1Q5TC84 451 aaPredicted RBP15.88■□□□□ 0.13
LETMD1-220ENST00000549686 WBP2NLQ6ICG8 309 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 LINC00696Q6ZRV3 163 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 PACS2Q86VP3 889 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 PACRGLQ8N7B6 248 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 PSD4Q8NDX1 1056 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 ADAMTS16Q8TE57 1224 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 HAS2Q92819 552 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 SLC41A3Q96GZ6 507 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 TMEM41AQ96HV5 264 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 MPP4Q96JB8 637 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 RTN4RQ9BZR6 473 aa15.88■□□□□ 0.13
LETMD1-220ENST00000549686 SPTBN4Q9H254 2564 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 TMEM8BA6NDV4 472 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 ARRDC5A6NEK1 342 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 ANKUB1A6NFN9 424 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 K7ENP7 123 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 ELAVL4P26378 380 aaKnown RBP15.87■□□□□ 0.13
LETMD1-220ENST00000549686 ITPKBP27987 946 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 HTR2AP28223 471 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 LIMS1P48059 325 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 HOXC5Q00444 222 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 GANABQ14697 944 aaKnown RBP15.87■□□□□ 0.13
LETMD1-220ENST00000549686 OR1C1Q15619 314 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 COL28A1Q2UY09 1125 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 NDUFAF6Q330K2 333 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 ULK3Q6PHR2 472 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 INO80CQ6PI98 192 aaPredicted RBP15.87■□□□□ 0.13
LETMD1-220ENST00000549686 CBLN3Q6UW01 205 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 IGFL2Q6UWQ7 119 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 FDCSPQ8NFU4 85 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 OR4C15Q8NGM1 316 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 TMEM234Q8WY98 164 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 TM9SF4Q92544 642 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 SLC38A4Q969I6 547 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 SH3YL1Q96HL8 342 aaPredicted RBP15.87■□□□□ 0.13
LETMD1-220ENST00000549686 DCBLD2Q96PD2 775 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 GABARAPL1Q9H0R8 117 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 PTGES2Q9H7Z7 377 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 C12orf10Q9HB07 376 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 GALNT9Q9HCQ5 603 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 OAZ3Q9UMX2 235 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 PCDHGB6Q9Y5F9 930 aa15.87■□□□□ 0.13
LETMD1-220ENST00000549686 PCDHGA9Q9Y5G4 932 aaKnown RBP15.87■□□□□ 0.13
LETMD1-220ENST00000549686 A0A0B4J2E0 115 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 A0A1B0GX12 115 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 FAM47E-STBD1D6RA91 191 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 SNPHO15079 494 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 OIP5O43482 229 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 CHP2O43745 196 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 PNMTP11086 282 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 CD46P15529 392 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 CNR1P21554 472 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 PEX2P28328 305 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 RYKP34925 604 aa15.86■□□□□ 0.13
LETMD1-220ENST00000549686 VHLP40337 213 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms