RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ZNF17P17021 662 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 CRYGSP22914 178 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 PSMA4P25789 261 aaKnown RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 LCN1P31025 176 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 SFTPDP35247 375 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 SOAT1P35610 550 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 SERPINB5P36952 375 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 ATP12AP54707 1039 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 CASP9P55211 416 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 RPS26P62854 115 aaKnown RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 OCRLQ01968 901 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF117Q03924 483 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 GPR68Q15743 365 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 CHI3L2Q15782 390 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 PDCD2Q16342 344 aaPredicted RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 CTU2Q2VPK5 515 aaKnown RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 NDUFAF6Q330K2 333 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 KRT71Q3SY84 523 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 TMEM176BQ3YBM2 270 aaPredicted RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 KLHL26Q53HC5 615 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 XKR7Q5GH72 579 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 DCST2Q5T1A1 773 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 PDSS1Q5T2R2 415 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 GTF2IRD2BQ6EKJ0 949 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 EMBQ6PCB8 327 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 CBLN3Q6UW01 205 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 C22orf34Q6ZV56 151 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 ESPNLQ6ZVH7 1005 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 C6orf120Q7Z4R8 191 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 GTF2IRD2Q86UP8 949 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 NATD1Q8N6N6 113 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF527Q8NB42 609 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 OR56A1Q8NGH5 318 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 OR5D16Q8NGK9 328 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 RFWD2Q8NHY2 731 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 FBXO27Q8NI29 283 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 AENQ8WTP8 325 aaKnown RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 REXO5Q96IC2 774 aaKnown RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 GMPPAQ96IJ6 420 aaPredicted RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 ADGRG7Q96K78 797 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 OR7D2Q96RA2 312 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 STACQ99469 402 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 SMR3AQ99954 134 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 DUSP26Q9BV47 211 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 BHLHE41Q9C0J9 482 aaPredicted RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 HOXD1Q9GZZ0 328 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 CENPHQ9H3R5 247 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 C12orf49Q9H741 205 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 AKTIPQ9H8T0 292 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 UBTD1Q9HAC8 227 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 DUSP22Q9NRW4 184 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 GPATCH2Q9NW75 528 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 PAQR5Q9NXK6 330 aaPredicted RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 NF1P21359 2839 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 INTS1Q8N201 2190 aaKnown RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 HCFC1P51610 2035 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 PHF3Q92576 2039 aaKnown RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 MAP1AP78559 2803 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 A0A1W2PQD3 144 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 C7orf72A4D263 438 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 ARHGEF9O43307 516 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 EFNA2O43921 213 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 FCMRO60667 390 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 SMPD2O60906 423 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 SS18L1O75177 396 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 SOX30O94993 753 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 KRT16P08779 473 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 PABPC4LP0CB38 370 aaKnown RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 FPR1P21462 350 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 MATN1P21941 496 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 SHC1P29353 583 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 HOXC12P31275 282 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 CCKARP32238 428 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 EIF1P41567 113 aaKnown RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 ETV4P43268 484 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 PCYT1AP49585 367 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 RPL14P50914 215 aaKnown RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 CLDN8P56748 225 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 ABCE1P61221 599 aaKnown RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 HBA1P69905 142 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 EMX2Q04743 252 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 FOXF1Q12946 379 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 MAD2L1Q13257 205 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 GUSBP1Q15486 140 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 TOMM34Q15785 309 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 ACKR1Q16570 336 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 EXOSC6Q5RKV6 272 aaKnown RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 OR4F3Q6IEY1 312 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 WDR93Q6P2C0 686 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 BHLHB9Q6PI77 547 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 Q71RC1 249 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 OLIG3Q7RTU3 272 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 MTERF4Q7Z6M4 381 aaKnown RBP5.99□□□□□ -1.45
SCAF11-211ENST00000547950 STK32CQ86UX6 486 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 P3H2Q8IVL5 708 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 RIMKLAQ8IXN7 391 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 CLECL1Q8IZS7 167 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 TMCO5AQ8N6Q1 288 aa5.99□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF781Q8N8C0 355 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms