RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 LCN1P31025 176 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 EIF1P41567 113 aaKnown RBP18.13■□□□□ 0.49
SSH1-207ENST00000547862 RPS4XP62701 263 aaKnown RBP18.13■□□□□ 0.49
SSH1-207ENST00000547862 PTGR1Q14914 329 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 TOMM34Q15785 309 aaPredicted RBP18.13■□□□□ 0.49
SSH1-207ENST00000547862 TMEM176BQ3YBM2 270 aaPredicted RBP18.13■□□□□ 0.49
SSH1-207ENST00000547862 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.13■□□□□ 0.49
SSH1-207ENST00000547862 FCRLAQ7L513 359 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 ATG4DQ86TL0 474 aaPredicted RBP18.13■□□□□ 0.49
SSH1-207ENST00000547862 TDRPQ86YL5 185 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 ZNF611Q8N823 705 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 STEAP2Q8NFT2 490 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 ADAMTS15Q8TE58 950 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 ZFP90Q8TF47 636 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 IGFBPL1Q8WX77 278 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 NEUROG1Q92886 237 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 MTERF3Q96E29 417 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 APOPT1Q96IL0 206 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 STACQ99469 402 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 TRMOQ9BU70 441 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 PIGUQ9H490 435 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 CXorf36Q9H7Y0 433 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 COQ10BQ9H8M1 238 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 TIGARQ9NQ88 270 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 DUSP22Q9NRW4 184 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 FAF1Q9UNN5 650 aaPredicted RBP18.13■□□□□ 0.49
SSH1-207ENST00000547862 RNF115Q9Y4L5 304 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 KCNE3Q9Y6H6 103 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 CSPG4Q6UVK1 2322 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 DNHD1Q96M86 4753 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 CHD3Q12873 2000 aaKnown RBP18.12■□□□□ 0.49
SSH1-207ENST00000547862 A0A1W2PNR3 127 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 H3BNH8 94 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 ZNF195O14628 629 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 CFLARO15519 480 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 GCM2O75603 506 aaPredicted RBP18.12■□□□□ 0.49
SSH1-207ENST00000547862 PABPC4LP0CB38 370 aaKnown RBP18.12■□□□□ 0.49
SSH1-207ENST00000547862 MAPK1P28482 360 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 SLC7A1P30825 629 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 CCT3P49368 545 aaKnown RBP18.12■□□□□ 0.49
SSH1-207ENST00000547862 P2RX1P51575 399 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 RNPS1Q15287 305 aaKnown RBP18.12■□□□□ 0.49
SSH1-207ENST00000547862 EXOSC6Q5RKV6 272 aaKnown RBP18.12■□□□□ 0.49
SSH1-207ENST00000547862 RNF165Q6ZSG1 346 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.12■□□□□ 0.49
SSH1-207ENST00000547862 OR2W6PQ8NHA6 318 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 KISS1RQ969F8 398 aaPredicted RBP18.12■□□□□ 0.49
SSH1-207ENST00000547862 TMEM204Q9BSN7 226 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 ACTRT3Q9BYD9 372 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 ANKZF1Q9H8Y5 726 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 ATP6V1HQ9UI12 483 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 TRAF6Q9Y4K3 522 aa18.12■□□□□ 0.49
SSH1-207ENST00000547862 GJE1A6NN92 205 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 EFNA2O43921 213 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 CYP7B1O75881 506 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 HSPA4LO95757 839 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 ADAP00813 363 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 CD3EP07766 207 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 CDKN1AP38936 164 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 RPL3P39023 403 aaKnown RBP18.11■□□□□ 0.49
SSH1-207ENST00000547862 RPS26P62854 115 aaKnown RBP18.11■□□□□ 0.49
SSH1-207ENST00000547862 FAPQ12884 760 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 TNK1Q13470 666 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 TAB1Q15750 504 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 STK11Q15831 433 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 ATP6AP1LQ52LC2 224 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 ARL13AQ5H913 290 aaPredicted RBP18.11■□□□□ 0.49
SSH1-207ENST00000547862 MTERF4Q7Z6M4 381 aaKnown RBP18.11■□□□□ 0.49
SSH1-207ENST00000547862 KRTCAP2Q8N6L1 136 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 KBTBD8Q8NFY9 601 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 OR56A1Q8NGH5 318 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 OR5D16Q8NGK9 328 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 FBXW5Q969U6 566 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 GTPBP3Q969Y2 492 aaKnown RBP18.11■□□□□ 0.49
SSH1-207ENST00000547862 PPP3R2Q96LZ3 170 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 OR10A4Q9H209 315 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 PPCSQ9HAB8 311 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 ZNF701Q9NV72 531 aaPredicted RBP18.11■□□□□ 0.49
SSH1-207ENST00000547862 SLC17A7Q9P2U7 560 aa18.11■□□□□ 0.49
SSH1-207ENST00000547862 GPC6Q9Y625 555 aaPredicted RBP18.11■□□□□ 0.49
SSH1-207ENST00000547862 SPAG7O75391 227 aa18.1■□□□□ 0.49
SSH1-207ENST00000547862 SLU7O95391 586 aaKnown RBP18.1■□□□□ 0.49
SSH1-207ENST00000547862 PRKCAP17252 672 aa18.1■□□□□ 0.49
SSH1-207ENST00000547862 MLC1Q15049 377 aa18.1■□□□□ 0.49
SSH1-207ENST00000547862 ADAM5Q6NVV9 412 aa18.1■□□□□ 0.49
SSH1-207ENST00000547862 GABRG1Q8N1C3 465 aa18.1■□□□□ 0.49
SSH1-207ENST00000547862 FNDC5Q8NAU1 212 aa18.1■□□□□ 0.49
SSH1-207ENST00000547862 OR5P2Q8WZ92 322 aa18.1■□□□□ 0.49
SSH1-207ENST00000547862 MDFIQ99750 246 aa18.1■□□□□ 0.49
SSH1-207ENST00000547862 ESRP2Q9H6T0 727 aaKnown RBP18.1■□□□□ 0.49
SSH1-207ENST00000547862 EML4Q9HC35 981 aaKnown RBP18.1■□□□□ 0.49
SSH1-207ENST00000547862 ICAM5Q9UMF0 924 aa18.1■□□□□ 0.49
SSH1-207ENST00000547862 C9JVG2 144 aa18.09■□□□□ 0.49
SSH1-207ENST00000547862 RNF223E7ERA6 249 aa18.09■□□□□ 0.49
SSH1-207ENST00000547862 NPHS1O60500 1241 aa18.09■□□□□ 0.49
SSH1-207ENST00000547862 LYZL6O75951 148 aa18.09■□□□□ 0.49
SSH1-207ENST00000547862 PRKD3O94806 890 aa18.09■□□□□ 0.49
SSH1-207ENST00000547862 SOD3P08294 240 aa18.09■□□□□ 0.49
SSH1-207ENST00000547862 KRT16P08779 473 aa18.09■□□□□ 0.49
SSH1-207ENST00000547862 UBL4AP11441 157 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms