RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 OR1K1Q8NGR3 316 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 OR2T11Q8NH01 316 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 MAPK15Q8TD08 544 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 TSEN15Q8WW01 171 aaKnown RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 ST8SIA1Q92185 356 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 TM9SF4Q92544 642 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 TAF15Q92804 592 aaKnown RBP eCLIP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 DLX4Q92988 240 aaPredicted RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 C18orf25Q96B23 403 aaPredicted RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 C10orf35Q96D05 121 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 HAVCR1Q96D42 359 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 PANX1Q96RD7 426 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 SIKE1Q9BRV8 207 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 TTYH2Q9BSA4 534 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 DUSP16Q9BY84 665 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 PARD6BQ9BYG5 372 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 EHD1Q9H4M9 534 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 HAUS4Q9H6D7 363 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 SIX2Q9NPC8 291 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 LZTFL1Q9NQ48 299 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 SLC17A5Q9NRA2 495 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 ZNHIT6Q9NWK9 470 aaKnown RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 MRPL22Q9NWU5 206 aaKnown RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 FAM120CQ9NX05 1096 aaKnown RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 PSMC3IPQ9P2W1 217 aaPredicted RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 MBD2Q9UBB5 411 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 GALPQ9UBC7 116 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 IKZF2Q9UKS7 526 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 EXOSC1Q9Y3B2 195 aaKnown RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 PNPLA6Q8IY17 1366 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 PLEKHG2Q9H7P9 1386 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 TET3O43151 1660 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 CUL9Q8IWT3 2517 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 A0A0G2JLW4 131 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 G3V4G9 280 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 TRMUO75648 421 aaKnown RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 PDE5AO76074 875 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 TOXO94900 526 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 CLPTM1O96005 669 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 PAK4O96013 591 aaPredicted RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 OTCP00480 354 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 IGF1P05019 195 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 UBTFL6P0CB48 400 aaPredicted RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 BCKDHAP12694 445 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 RDXP35241 583 aaKnown RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 RPL13AP40429 203 aaKnown RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 SLC7A2P52569 658 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 C21orf59P57076 290 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 OTUD4Q01804 1114 aaKnown RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 OGDHQ02218 1023 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 EMC2Q15006 297 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 CCDC6Q16204 474 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 ECSCRQ19T08 205 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 UNC50Q53HI1 259 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 SFT2D3Q587I9 215 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 FBXO48Q5FWF7 155 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 WDR38Q5JTN6 314 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 BEND3Q5T5X7 828 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 PIP5KL1Q5T9C9 394 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 RBMS3Q6XE24 437 aaKnown RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 HACD2Q6Y1H2 254 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 C9orf139Q6ZV77 190 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 ALLCQ8N6M5 410 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 STPG4Q8N801 248 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 KBTBD3Q8NAB2 608 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 ZSCAN4Q8NAM6 433 aaPredicted RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 TMEM178AQ8NBL3 297 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 TRPV1Q8NER1 839 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 BBS1Q8NFJ9 593 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 OR10A7Q8NGE5 316 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 OR51G2Q8NGK0 314 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 CNIH3Q8TBE1 160 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 SMAP2Q8WU79 429 aaPredicted RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 TECTBQ96PL2 329 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 C19orf43Q9BQ61 176 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 BPIFA3Q9BQP9 254 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 DPH7Q9BTV6 452 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 GPR174Q9BXC1 333 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 STRADBQ9C0K7 418 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 DNTTIP1Q9H147 329 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 MTHFD2LQ9H903 347 aaPredicted RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 Q9HAA7 133 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 SEC14L4Q9UDX3 406 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 ABCG2Q9UNQ0 655 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 TCF19Q9Y242 345 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 MEMO1Q9Y316 297 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 MRPL11Q9Y3B7 192 aaKnown RBP3.61□□□□□ -1.83
SCAF11-210ENST00000547654 TIMM10BQ9Y5J6 103 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 PIK3R4Q99570 1358 aa3.61□□□□□ -1.83
SCAF11-210ENST00000547654 EFCAB6Q5THR3 1501 aa3.6□□□□□ -1.83
SCAF11-210ENST00000547654 TMEM131LA2VDJ0 1609 aa3.6□□□□□ -1.83
SCAF11-210ENST00000547654 PLCH1Q4KWH8 1693 aa3.6□□□□□ -1.83
SCAF11-210ENST00000547654 LRP5LA4QPB2 252 aa3.6□□□□□ -1.83
SCAF11-210ENST00000547654 GOLGA8TH3BQL2 631 aa3.6□□□□□ -1.83
SCAF11-210ENST00000547654 K7ERI5 159 aa3.6□□□□□ -1.83
SCAF11-210ENST00000547654 HAS3O00219 553 aa3.6□□□□□ -1.83
SCAF11-210ENST00000547654 ZNF195O14628 629 aa3.6□□□□□ -1.83
SCAF11-210ENST00000547654 POLR3GO15318 223 aaPredicted RBP3.6□□□□□ -1.83
SCAF11-210ENST00000547654 MSH4O15457 936 aa3.6□□□□□ -1.83
SCAF11-210ENST00000547654 PPIHO43447 177 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms