RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 UTS2O95399 124 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 H6PDO95479 791 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 OXSR1O95747 527 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SP1P08047 785 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NGFRP08138 427 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NPIPA8P0DM63 369 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NR2F1P10589 423 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF24P17028 368 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 GPX2P18283 190 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 CALB2P22676 271 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SLC6A2P23975 617 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 LCN1P31025 176 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 DCTP40126 519 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 MASP1P48740 699 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 DNASE1L1P49184 302 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 MEOX1P50221 254 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 MNAT1P51948 309 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SLC7A2P52569 658 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 CRISP3P54108 245 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 CBX1P83916 185 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 PMP22Q01453 160 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NFATC3Q12968 1075 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SNTA1Q13424 505 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 ART3Q13508 389 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 GNA13Q14344 377 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SYPL1Q16563 259 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 GRAMD1BQ3KR37 738 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 ARHGAP11BQ3KRB8 267 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 GPAT3Q53EU6 434 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 RUNDC3AQ59EK9 446 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SLC22A10Q63ZE4 541 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 TYW3Q6IPR3 259 aaKnown RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SLC25A25Q6KCM7 469 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NANOGP8Q6NSW7 305 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 C8orf82Q6P1X6 216 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 TMEM81Q6P7N7 255 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 FRRS1Q6ZNA5 592 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 OLIG3Q7RTU3 272 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NUP54Q7Z3B4 507 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NET1Q7Z628 596 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 PTRH1Q86Y79 214 aaKnown RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF619Q8N2I2 560 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF614Q8N883 585 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 ANKFN1Q8N957 763 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 Q8NA96 180 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF527Q8NB42 609 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 POGLUT1Q8NBL1 392 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 FAM98AQ8NCA5 519 aaKnown RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 C11orf65Q8NCR3 313 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 LSM14AQ8ND56 463 aaKnown RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 BVESQ8NE79 360 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 OR2M7Q8NG81 312 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 BBS10Q8TAM1 723 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 FAM110BQ8TC76 370 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 GRHL3Q8TE85 626 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 MAL2Q969L2 176 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 TMEM19Q96HH6 336 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 BBC3Q96PG8 261 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 TRNT1Q96Q11 434 aaKnown RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NODALQ96S42 347 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SDF2Q99470 211 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SH3GL1Q99961 368 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 TREX2Q9BQ50 279 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 FAM173AQ9BQD7 235 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 GPATCH1Q9BRR8 931 aaKnown RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 THUMPD3Q9BV44 507 aaKnown RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SPATA9Q9BWV2 254 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 TBL1XR1Q9BZK7 514 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SLC38A1Q9H2H9 487 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 TMEM38AQ9H6F2 299 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF703Q9H7S9 590 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 KAT8Q9H7Z6 458 aaKnown RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NANOGQ9H9S0 305 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 EFCAB1Q9HAE3 211 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SPAG4Q9NPE6 437 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 POLE3Q9NRF9 147 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 DEPPQ9NTK1 212 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 FBXO34Q9NWN3 711 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NDE1Q9NXR1 346 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 CNIH4Q9P003 139 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 ABCD2Q9UBJ2 740 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 BOKQ9UMX3 212 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 ANGPT4Q9Y264 503 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 WDR45Q9Y484 360 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 WIF1Q9Y5W5 379 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 UBR5O95071 2799 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 GTF3C1Q12789 2109 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 KIAA1549Q9HCM3 1950 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 PINLYPA6NC86 204 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 C17orf51A8MQB3 221 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 FAM220BPB1ANY3 271 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 ALG1L2C9J202 215 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 C5orf58C9J3I9 102 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 NPIPB9F8W1W9 429 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 ACOT7O00154 380 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 NME4O00746 187 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 SCDO00767 359 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 ADAM10O14672 748 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 PEX1O43933 1283 aa5.77□□□□□ -1.49
PRKDC-211ENST00000546304 FADS1O60427 444 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms