RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 LAT2Q9GZY6 243 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 TPT1P8Q9HAU6 139 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 MED4Q9NPJ6 270 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 SLC52A3Q9NQ40 469 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 MKLN1Q9UL63 735 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 CARD8Q9Y2G2 431 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 ZNF175Q9Y473 711 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 DOCK7Q96N67 2140 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 SHISA8B8ZZ34 492 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 H0YC42 278 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 H3BML4 177 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 ADAMDEC1O15204 470 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 ATP8B1O43520 1251 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 ANP32DO95626 131 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 NTN1O95631 604 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 TGM6O95932 706 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 CRHP06850 196 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 TMIGD3P0DMS9 266 aaPredicted RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 BMP5P22003 454 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 TPD52P55327 224 aaPredicted RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 RPS3AP61247 264 aaKnown RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 EEF1A1P68104 462 aaKnown RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 HPCAP84074 193 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 SKP2Q13309 424 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 SQLEQ14534 574 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 MAPK14Q16539 360 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 GTDC1Q4AE62 458 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 COX20Q5RI15 118 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 C6orf10Q5SRN2 563 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 LRIF1Q5T3J3 769 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 EEF1A1P5Q5VTE0 462 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 MEX3BQ6ZN04 569 aaKnown RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 EIF3MQ7L2H7 374 aaKnown RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 CHMP1BQ7LBR1 199 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 OLIG3Q7RTU3 272 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 GRAMD2AQ8IUY3 354 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 MCEMP1Q8IX19 187 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 DMRTC2Q8IXT2 367 aaPredicted RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 UBQLNLQ8IYU4 475 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 ZNF614Q8N883 585 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 ANKFN1Q8N957 763 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 GPR119Q8TDV5 335 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 ADGRG7Q96K78 797 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 MRGPRX4Q96LA9 322 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 RNF145Q96MT1 663 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 NPAS1Q99742 590 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 SFXN3Q9BWM7 321 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 TRIM8Q9BZR9 551 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 PAIP1Q9H074 479 aaKnown RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 SLC38A1Q9H2H9 487 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 RABEP2Q9H5N1 569 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 THUMPD1Q9NXG2 353 aaKnown RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 PAQR5Q9NXK6 330 aaPredicted RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 JKAMPQ9P055 326 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 SLC35A3Q9Y2D2 325 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 L3MBTL1Q9Y468 752 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 GPC6Q9Y625 555 aaPredicted RBP10.69□□□□□ -0.7
YBX3-217ENST00000546164 GMEB1Q9Y692 573 aa10.69□□□□□ -0.7
YBX3-217ENST00000546164 KIAA1549Q9HCM3 1950 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 UQCRHLA0A096LP55 91 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 A0A096LPI6 279 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 AGAP5A6NIR3 686 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 SLC22A20A6NK97 555 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 SYT5O00445 386 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 SEC14L5O43304 696 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 H6PDO95479 791 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 CSTAP01040 98 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 CHRM4P08173 479 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 BMP2P12643 396 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 PRF1P14222 555 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 PRKCAP17252 672 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 RPS4Y1P22090 263 aaKnown RBP10.68□□□□□ -0.7
YBX3-217ENST00000546164 PGM1P36871 562 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 PEX19P40855 299 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 ASCL1P50553 236 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 RNF144AP50876 292 aaPredicted RBP10.68□□□□□ -0.7
YBX3-217ENST00000546164 DLX5P56178 289 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 CHRNEQ04844 493 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 FOXF1Q12946 379 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 FOXF2Q12947 444 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 CBFBQ13951 182 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 MAPK11Q15759 364 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 SYPL1Q16563 259 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 CTU2Q2VPK5 515 aaKnown RBP10.68□□□□□ -0.7
YBX3-217ENST00000546164 NDUFAF6Q330K2 333 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 GPAT3Q53EU6 434 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 HSP90B2PQ58FF3 399 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 METTL21CQ5VZV1 264 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 OR2A2Q6IF42 318 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 SLC2A7Q6PXP3 512 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 ESPNLQ6ZVH7 1005 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 GDF7Q7Z4P5 450 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 CMIPQ8IY22 773 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 ZNF295-AS1Q8N0V1 137 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 RFWD2Q8NHY2 731 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 PNPT1Q8TCS8 783 aaKnown RBP10.68□□□□□ -0.7
YBX3-217ENST00000546164 FIG4Q92562 907 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 ZG16BQ96DA0 208 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 SPDL1Q96EA4 605 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 C14orf79Q96F83 325 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms