RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PRR23D1E9PI22 279 aaPredicted RBP13.21□□□□□ -0.3
SRP54-202ENST00000546080 MAN2B1O00754 1011 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 CTDSPLO15194 276 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 PPM1DO15297 605 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 OR5F1O95221 314 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 ZGLP1P0C6A0 271 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 PRR23D2P0DMB1 279 aaPredicted RBP13.21□□□□□ -0.3
SRP54-202ENST00000546080 ICAM2P13598 275 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 PRR5P85299 388 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 ZNF750Q32MQ0 723 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 PARS2Q7L3T8 475 aaKnown RBP13.21□□□□□ -0.3
SRP54-202ENST00000546080 OR11G2Q8NGC1 345 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 BRIX1Q8TDN6 353 aaKnown RBP13.21□□□□□ -0.3
SRP54-202ENST00000546080 KISS1RQ969F8 398 aaPredicted RBP13.21□□□□□ -0.3
SRP54-202ENST00000546080 MOAP1Q96BY2 351 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 PGLYRP3Q96LB9 341 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 CXorf58Q96LI9 332 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 LINC00615Q96LM1 132 aaPredicted RBP13.21□□□□□ -0.3
SRP54-202ENST00000546080 HCAR1Q9BXC0 346 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 SHARPINQ9H0F6 387 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 OR10A4Q9H209 315 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 OR52A5Q9H2C5 316 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 ZMIZ1Q9ULJ6 1067 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 RCE1Q9Y256 329 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 THSD7BQ9C0I4 1608 aa13.21□□□□□ -0.3
SRP54-202ENST00000546080 UNC119BA6NIH7 251 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 SLC22A31A6NKX4 558 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 KRBOX1C9JBD0 128 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 FLRT2O43155 660 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 GMDSO60547 372 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 RGS11O94810 467 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 EPXP11678 715 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 CXCL2P19875 107 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 PRKAR1BP31321 381 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 NRG3P56975 720 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 DHODHQ02127 395 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 C9orf64Q5T6V5 341 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 CFAP77Q6ZQR2 320 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 LINGO2Q7L985 606 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 OVCH2Q7RTZ1 564 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 TEX19Q8NA77 164 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 FAM98AQ8NCA5 519 aaKnown RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 ZNF671Q8TAW3 534 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 GANCQ8TET4 914 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 TFGQ92734 400 aaPredicted RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 ZNF514Q96K75 400 aaPredicted RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 TRMT61BQ9BVS5 477 aaKnown RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 IFT27Q9BW83 186 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 DPH1Q9BZG8 443 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 OR51V1Q9H2C8 321 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 POLMQ9NP87 494 aaPredicted RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 MED9Q9NWA0 146 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 PFDN2Q9UHV9 154 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 BRCA2P51587 3418 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 TRAV1-2A0A0B4J238 106 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 A0A1B0GUH1 482 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 A0A1W2PPK0 400 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 NRG2O14511 850 aaPredicted RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 MID1O15344 667 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 ITGA10O75578 1167 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 C8orf89P0DMQ9 161 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 PRG2P13727 222 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 BMP7P18075 431 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 PSMB1P20618 241 aaKnown RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 CCR9P51686 369 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 OR12D2P58182 307 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 DUSP2Q05923 314 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 TMEM215Q68D42 235 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 RGS7BPQ6MZT1 257 aaPredicted RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 ZNF793Q6ZN11 406 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 FAM71CQ8NEG0 241 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 NUP43Q8NFH3 380 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 GHSRQ92847 366 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 NUS1Q96E22 293 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 LCORQ96JN0 433 aaPredicted RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 DPYSL5Q9BPU6 564 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 ORAI3Q9BRQ5 295 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 HRASLSQ9HDD0 168 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 NPDC1Q9NQX5 325 aaPredicted RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 AKAP7Q9P0M2 348 aaPredicted RBP13.2□□□□□ -0.3
SRP54-202ENST00000546080 PRKAB1Q9Y478 270 aa13.2□□□□□ -0.3
SRP54-202ENST00000546080 A0A1W2PQ45 241 aaPredicted RBP13.19□□□□□ -0.3
SRP54-202ENST00000546080 A0A1W2PQY0 241 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 PLSCR5A0PG75 271 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 CDHR4A6H8M9 788 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 FAM86C2PA6NEL3 165 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 ARPC1BO15143 372 aaKnown RBP13.19□□□□□ -0.3
SRP54-202ENST00000546080 EMC8O43402 210 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 SERPINA3P01011 423 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 ERGP11308 486 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 TYRP14679 529 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 PRKACAP17612 351 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 ZNF273Q14593 569 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 SLC9A5Q14940 896 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 DMKNQ6E0U4 476 aaPredicted RBP13.19□□□□□ -0.3
SRP54-202ENST00000546080 SLC25A25Q6KCM7 469 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 SYT9Q86SS6 491 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 ASPGQ86U10 573 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 FBXW5Q969U6 566 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 SGTBQ96EQ0 304 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms