RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 TMEM27Q9HBJ8 222 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 QPCTLQ9NXS2 382 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 FLRT3Q9NZU0 649 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 NDUFAF4Q9P032 175 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 C6orf203Q9P0P8 240 aaPredicted RBP14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 B4GALT7Q9UBV7 327 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 MRPS18CQ9Y3D5 142 aaKnown RBP14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 MAP1BP46821 2468 aaKnown RBP14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 LAMA5O15230 3695 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 FAM47E-STBD1D6RA91 191 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 SCO2O43819 266 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 CDC40O60508 579 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 TRIM3O75382 744 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 CBR3O75828 277 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 SP1P08047 785 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 LINGO3P0C6S8 592 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 SFTPCP11686 197 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 FKBP2P26885 142 aaKnown RBP14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 MASP1P48740 699 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF136P52737 540 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 CXADRP78310 365 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 VLDLRP98155 873 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 HYAL4Q2M3T9 481 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 GLYR1Q49A26 553 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 GLIPR1L2Q4G1C9 344 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 IQCCQ4KMZ1 466 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 TIGD3Q6B0B8 471 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 WBP2NLQ6ICG8 309 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 LINC00471Q8N535 108 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 AMER2Q8N7J2 671 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 PIK3C3Q8NEB9 887 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 SLCO4A1Q96BD0 722 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 MPP4Q96JB8 637 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 DHRS1Q96LJ7 313 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 PIP5K1AQ99755 562 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 RSPO3Q9BXY4 272 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 AMBRA1Q9C0C7 1298 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 RLIMQ9NVW2 624 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 STX18Q9P2W9 335 aaKnown RBP14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 DNAJB9Q9UBS3 223 aa14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 DSPP15924 2871 aaKnown RBP14.61□□□□□ -0.07
PRPF40A-212ENST00000545856 C7orf72A4D263 438 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 PRSS23O95084 383 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 LDLRP01130 860 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ADH6P28332 368 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 EIF1P41567 113 aaKnown RBP14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ACAA2P42765 397 aaKnown RBP14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 PLAURQ03405 335 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ST3GAL3Q11203 375 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ATP6AP1Q15904 470 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 OR2T5Q6IEZ7 315 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 MDGA2Q7Z553 956 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 OR4K17Q8NGC6 315 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 OR1J4Q8NGS1 313 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 OR2T29Q8NH02 315 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 DUSP19Q8WTR2 217 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 PYDC1Q8WXC3 89 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ZBTB8AQ96BR9 441 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 NRBF2Q96F24 287 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 MCHR1Q99705 422 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ZFP64Q9NPA5 681 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 C8orf4Q9NR00 106 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 AGPAT4Q9NRZ5 378 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 CARD8Q9Y2G2 431 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 V9GYQ6 96 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 CFAP47Q6ZTR5 3102 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 A0A1W2PRQ8 180 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 TRAPPC13A5PLN9 417 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 CLDN24A6NM45 220 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 H3BNX3 289 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 M0R3H8 397 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 PNMTP11086 282 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 SLC1A3P43003 542 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF41P51814 821 aaPredicted RBP14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 DSCR4P56555 118 aaPredicted RBP14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 DGCR6Q14129 220 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 COL28A1Q2UY09 1125 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 SLC25A53Q5H9E4 307 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF766Q5HY98 468 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 RPUSD3Q6P087 351 aaKnown RBP14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ULK3Q6PHR2 472 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 C5orf46Q6UWT4 87 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF605Q86T29 641 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 PQLC1Q8N2U9 271 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 TMCO5AQ8N6Q1 288 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 ZFP62Q8NB50 900 aaPredicted RBP14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 CENPNQ96H22 339 aaPredicted RBP14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 SIGLEC12Q96PQ1 595 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 PRORYQ9H606 182 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 RNPEPL1Q9HAU8 725 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 PROK2Q9HC23 129 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 SELENONQ9NZV5 590 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 RPS6KB2Q9UBS0 482 aa14.6□□□□□ -0.07
PRPF40A-212ENST00000545856 MGAQ8IWI9 3026 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 A0A0B4J2E0 115 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 A0A1B0GX12 115 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 ARRDC5A6NEK1 342 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 LINC01387J3KSC0 135 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 CLOCKO15516 846 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms