RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 C1GALT1C1Q96EU7 318 aa14.79□□□□□ -0.04
LIMS2-217ENST00000545738 ZNF607Q96SK3 696 aa14.79□□□□□ -0.04
LIMS2-217ENST00000545738 PRR14Q9BWN1 585 aa14.79□□□□□ -0.04
LIMS2-217ENST00000545738 DEFB127Q9H1M4 99 aa14.79□□□□□ -0.04
LIMS2-217ENST00000545738 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-217ENST00000545738 ANAPC2Q9UJX6 822 aa14.79□□□□□ -0.04
LIMS2-217ENST00000545738 RP1L1Q8IWN7 2480 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-217ENST00000545738 TTLL8A6PVC2 850 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 SUV39H1O43463 412 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 SEMA7AO75326 666 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 DNAJC8O75937 253 aaPredicted RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 PDE9AO76083 593 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 ACAA2P42765 397 aaKnown RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 CLK3P49761 638 aaKnown RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 ZNF136P52737 540 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 DNAL1Q4LDG9 190 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 INTS11Q5TA45 600 aaKnown RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 CCDC121Q6ZUS5 278 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 YRDCQ86U90 279 aaKnown RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 KRT73Q86Y46 540 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 GRAMD2AQ8IUY3 354 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 MISPQ8IVT2 679 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 FAM98AQ8NCA5 519 aaKnown RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 FAM83FQ8NEG4 500 aaPredicted RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 GPR119Q8TDV5 335 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 FAR1Q8WVX9 515 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 OIT3Q8WWZ8 545 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 NR4A3Q92570 626 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 SLX1AQ9BQ83 275 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 LAT2Q9GZY6 243 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 SLC6A15Q9H2J7 730 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 TNFRSF10DQ9UBN6 386 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 VDAC3Q9Y277 283 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 SLC35A3Q9Y2D2 325 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 IFT52Q9Y366 437 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 VGLL3A8MV65 326 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 NPIPA5E9PKD4 350 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 M0R3H8 397 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 GTPBP1O00178 669 aaKnown RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 TFECO14948 347 aaPredicted RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 CBR3O75828 277 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 SERPINA1P01009 418 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 LINGO3P0C6S8 592 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 RYKP34925 604 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 P2RX1P51575 399 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 CCR4P51679 360 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 LARS2Q15031 903 aaKnown RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 NPTX1Q15818 432 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 CYBRD1Q53TN4 286 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 WIPI1Q5MNZ9 446 aaPredicted RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 ZNF771Q7L3S4 317 aaPredicted RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 FGD2Q7Z6J4 655 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 CMIPQ8IY22 773 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 ULK2Q8IYT8 1036 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 FAM109AQ8N4B1 249 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 TMCO5AQ8N6Q1 288 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 OR4K17Q8NGC6 315 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 POC1BQ8TC44 478 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 PINK1Q9BXM7 581 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 SDHAF3Q9NRP4 125 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 MED17Q9NVC6 651 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 NPIPA1Q9UND3 350 aa14.78□□□□□ -0.04
LIMS2-217ENST00000545738 RPH3AQ9Y2J0 694 aaPredicted RBP14.78□□□□□ -0.04
LIMS2-217ENST00000545738 H3BNH8 94 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 ACOT8O14734 319 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 EIF4E2O60573 245 aaKnown RBP14.77□□□□□ -0.05
LIMS2-217ENST00000545738 SERPINB7O75635 380 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 ATP5HO75947 161 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 LGI1O95970 557 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 HPNP05981 417 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 FESP07332 822 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 FUT4P22083 530 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 ME2P23368 584 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 DPP4P27487 766 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 HTR2AP28223 471 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 B3GALT5-AS1P59052 145 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 ALDH6A1Q02252 535 aaKnown RBP14.77□□□□□ -0.05
LIMS2-217ENST00000545738 PLPPR5Q32ZL2 321 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 FAM180AQ6UWF9 173 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 CYP2R1Q6VVX0 501 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 SLC22A16Q86VW1 577 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 ARHGAP24Q8N264 748 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 OR5W2Q8NH69 310 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 EXOSC3Q9NQT5 275 aaKnown RBP14.77□□□□□ -0.05
LIMS2-217ENST00000545738 PLSCR2Q9NRY7 297 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 SLC7A8Q9UHI5 535 aa14.77□□□□□ -0.05
LIMS2-217ENST00000545738 ANKUB1A6NFN9 424 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 GSTA4O15217 222 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 TRAPPC6AO75865 159 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 IL11P20809 199 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 OR1E2P47887 323 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 EPS8Q12929 822 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 TRIM25Q14258 630 aaKnown RBP14.76□□□□□ -0.05
LIMS2-217ENST00000545738 NRF1Q16656 503 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 TMEM44Q2T9K0 475 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 DCST1Q5T197 706 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 ENPP6Q6UWR7 440 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 CBLL1Q75N03 491 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 TRILQ7L0X0 811 aa14.76□□□□□ -0.05
LIMS2-217ENST00000545738 OR6T1Q8NGN1 323 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms