RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 EBPLQ9BY08 206 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 ACPTQ9BZG2 426 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 METTL17Q9H7H0 456 aaPredicted RBP8.23□□□□□ -1.09
CHD4-212ENST00000545083 MYNNQ9NPC7 610 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 EQTNQ9NQ60 294 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 TIGARQ9NQ88 270 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 NMRK1Q9NWW6 199 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 KLHL9Q9P2J3 617 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 METRNQ9UJH8 293 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 SNX6Q9UNH7 406 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 TRAF6Q9Y4K3 522 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 FKBP7Q9Y680 259 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 A0A0A6YYJ9 748 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 ATP6V1G2-DDX39BF2Z307 99 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 SLCO1B7G3V0H7 640 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 STX16-NPEPL1H3BU86 382 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 STX16O14662 325 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 CYTIPO60759 359 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 LILRA1O75019 489 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 NKX2-2O95096 273 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 SLU7O95391 586 aaKnown RBP8.22□□□□□ -1.09
CHD4-212ENST00000545083 BMP4P12644 408 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 DDCP20711 480 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 TIA1P31483 386 aaKnown RBP eCLIP8.22□□□□□ -1.09
CHD4-212ENST00000545083 NTF4P34130 210 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 EIF1P41567 113 aaKnown RBP8.22□□□□□ -1.09
CHD4-212ENST00000545083 RAC3P60763 192 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 PHC1P78364 1004 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 SLC25A3Q00325 362 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 ZNF117Q03924 483 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 RASGEF1BQ0VAM2 473 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 HEPACAMQ14CZ8 416 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 PRR31Q5SQ13 230 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 KLC3Q6P597 504 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 KLHL17Q6TDP4 642 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 CBLN3Q6UW01 205 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 WDR31Q8NA23 367 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 B4GALNT2Q8NHY0 566 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 FBXO30Q8TB52 745 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 GPR151Q8TDV0 419 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 FBF1Q8TES7 1133 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 ZNF483Q8TF39 744 aaPredicted RBP8.22□□□□□ -1.09
CHD4-212ENST00000545083 HOXB13Q92826 284 aaPredicted RBP8.22□□□□□ -1.09
CHD4-212ENST00000545083 GCDHQ92947 438 aaPredicted RBP8.22□□□□□ -1.09
CHD4-212ENST00000545083 MRRFQ96E11 262 aaKnown RBP8.22□□□□□ -1.09
CHD4-212ENST00000545083 AMDHD1Q96NU7 426 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 C3orf14Q9HBI5 128 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 NTMQ9P121 344 aa8.22□□□□□ -1.09
CHD4-212ENST00000545083 NOTCH1P46531 2555 aa8.21□□□□□ -1.09
CHD4-212ENST00000545083 VWFP04275 2813 aa8.21□□□□□ -1.09
CHD4-212ENST00000545083 HEATR1Q9H583 2144 aaKnown RBP8.21□□□□□ -1.09
CHD4-212ENST00000545083 NPIPA5A0A0B4J1W7 369 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 CIB4A0PJX0 185 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 CCT8L1PA6NM43 557 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 ZNF724A8MTY0 619 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 GOLGA6L6A8MZA4 724 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 FAM157AC9JC47 383 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 NPIPA7E9PJI5 369 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 EIF3HO15372 352 aaKnown RBP eCLIP8.21□□□□□ -1.1
CHD4-212ENST00000545083 SLITRK5O94991 958 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 KCNK2O95069 426 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 H6PDO95479 791 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 OTCP00480 354 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 ITGA5P08648 1049 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 GSTA2P09210 222 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 TACSTD2P09758 323 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 NPIPA8P0DM63 369 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 ACP2P11117 423 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 HSD3B1P14060 373 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 HSD3B2P26439 372 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 APEX1P27695 318 aaKnown RBP8.21□□□□□ -1.1
CHD4-212ENST00000545083 CDH15P55291 814 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 LGALS3BPQ08380 585 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 C2orf80Q0P641 193 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 GABRA6Q16445 453 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 FBXW9Q5XUX1 488 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 GALNT18Q6P9A2 607 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 CCDC91Q7Z6B0 441 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 GALNT5Q7Z7M9 940 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 ZNF100Q8IYN0 542 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 LINC01356Q8N9X3 169 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 CDC26Q8NHZ8 85 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 OTUB1Q96FW1 271 aaPredicted RBP8.21□□□□□ -1.1
CHD4-212ENST00000545083 MRGPRX4Q96LA9 322 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 MUS81Q96NY9 551 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 VRK1Q99986 396 aaPredicted RBP8.21□□□□□ -1.1
CHD4-212ENST00000545083 VPS11Q9H270 941 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 DPH5Q9H2P9 285 aa8.21□□□□□ -1.1
CHD4-212ENST00000545083 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.2□□□□□ -1.1
CHD4-212ENST00000545083 A0A0G2JK05 382 aa8.2□□□□□ -1.1
CHD4-212ENST00000545083 A0A1W2PQD3 144 aa8.2□□□□□ -1.1
CHD4-212ENST00000545083 SERINC4A6NH21 518 aa8.2□□□□□ -1.1
CHD4-212ENST00000545083 TTC36A6NLP5 189 aa8.2□□□□□ -1.1
CHD4-212ENST00000545083 GJE1A6NN92 205 aa8.2□□□□□ -1.1
CHD4-212ENST00000545083 TMPRSS2O15393 492 aa8.2□□□□□ -1.1
CHD4-212ENST00000545083 STAMBPO95630 424 aa8.2□□□□□ -1.1
CHD4-212ENST00000545083 ANXA4P09525 319 aaPredicted RBP8.2□□□□□ -1.1
CHD4-212ENST00000545083 SBK3P0C264 359 aa8.2□□□□□ -1.1
CHD4-212ENST00000545083 PRKCAP17252 672 aa8.2□□□□□ -1.1
CHD4-212ENST00000545083 BTKQ06187 659 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms