RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SPRYD4Q8WW59 207 aaPredicted RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 DIRAS2Q96HU8 199 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SOSTQ9BQB4 213 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 LMF2Q9BU23 707 aaKnown RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 DPH1Q9BZG8 443 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SLC22A4Q9H015 551 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 MOV10Q9HCE1 1003 aaKnown RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 GPR27Q9NS67 375 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 HRASLS2Q9NWW9 162 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 CLDND1Q9NY35 253 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 USP36Q9P275 1121 aaKnown RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 MMP17Q9ULZ9 603 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 BAIAP2Q9UQB8 552 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 MED31Q9Y3C7 131 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 A0A0B4J2E0 115 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 A0A1B0GX12 115 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 TCRBV21S2A2A0A5A6 115 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 FAM86C2PA6NEL3 165 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 OR5K3A6NET4 321 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 SLC22A31A6NKX4 558 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 PRAMEF26H0Y7S4 382 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 GABRPO00591 440 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CASKO14936 926 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CHP2O43745 196 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 HCN1O60741 890 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CBX7O95931 251 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 IGLV3-19P01714 112 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CSF3P09919 207 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 PVRP15151 417 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 GABRG2P18507 467 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CELP19835 753 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 DRD5P21918 477 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 AZGP1P25311 298 aaKnown RBP6.06□□□□□ -1.44
PTPRO-208ENST00000542557 BMP8BP34820 402 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 ATP6V1E1P36543 226 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 RBM34P42696 430 aaKnown RBP6.06□□□□□ -1.44
PTPRO-208ENST00000542557 RNF144AP50876 292 aaPredicted RBP6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CCR5P51681 352 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 PLAURQ03405 335 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 KCNJ8Q15842 424 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF791Q3KP31 576 aaPredicted RBP6.06□□□□□ -1.44
PTPRO-208ENST00000542557 PDZK1Q5T2W1 519 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 SMARCD3Q6STE5 483 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 BMP8AQ7Z5Y6 402 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 RAB43Q86YS6 212 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CDK20Q8IZL9 346 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 ARHGEF39Q8N4T4 335 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 ATP6V1C2Q8NEY4 427 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 OR13H1Q8NG92 308 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 OR5T3Q8NGG3 340 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 PFN4Q8NHR9 129 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 RPLP0P6Q8NHW5 317 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 SLC37A2Q8TED4 501 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 KISS1RQ969F8 398 aaPredicted RBP6.06□□□□□ -1.44
PTPRO-208ENST00000542557 ANKRD9Q96BM1 317 aaPredicted RBP6.06□□□□□ -1.44
PTPRO-208ENST00000542557 BPIFA2Q96DR5 249 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 NECTIN4Q96NY8 510 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF426Q9BUY5 554 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 HOXD1Q9GZZ0 328 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 KCNN2Q9H2S1 579 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 TMEM27Q9HBJ8 222 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 C20orf141Q9NUB4 165 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 SIGLEC7Q9Y286 467 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 F5P12259 2224 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 GOLGA4Q13439 2230 aaKnown RBP6.06□□□□□ -1.44
PTPRO-208ENST00000542557 BLACEA4D250 179 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 C12orf71A8MTZ7 269 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CT62P0C5K7 136 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 GKN3PP0CG01 181 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 GABRA3P34903 492 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 MTNR1BP49286 362 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 FOXK1P85037 733 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 DLX2Q07687 328 aaPredicted RBP6.06□□□□□ -1.44
PTPRO-208ENST00000542557 SPATC1Q76KD6 591 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 MARCH9Q86YJ5 346 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 VWA5B2Q8N398 1253 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 ZFP41Q8N8Y5 198 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 OR51G2Q8NGK0 314 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 NEIL3Q8TAT5 605 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 PATE1Q8WXA2 126 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 ACOT12Q8WYK0 555 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 LRFN5Q96NI6 719 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CTRCQ99895 268 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CCDC3Q9BQI4 270 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 TIGARQ9NQ88 270 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 FBXO34Q9NWN3 711 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 ADAM30Q9UKF2 790 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 POMT2Q9UKY4 750 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 SLC35A3Q9Y2D2 325 aa6.06□□□□□ -1.44
PTPRO-208ENST00000542557 CACNA1IQ9P0X4 2223 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 NPIPA5A0A0B4J1W7 369 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 GXYLT2A0PJZ3 443 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 FAM25EA8MYX2 175 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 NPIPA7E9PJI5 369 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 LRRTM2O43300 516 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 RNF13O43567 381 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TMCC2O75069 709 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 RGS9O75916 674 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 IGHV4-34P06331 123 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 NPIPA8P0DM63 369 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms