RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 ZNF559Q9BR84 538 aa10.13□□□□□ -0.79
SCG3-202ENST00000542355 ARHGAP9Q9BRR9 750 aa10.13□□□□□ -0.79
SCG3-202ENST00000542355 RSRP1Q9BUV0 290 aa10.13□□□□□ -0.79
SCG3-202ENST00000542355 FAM86C1Q9NVL1 165 aa10.13□□□□□ -0.79
SCG3-202ENST00000542355 CNIH4Q9P003 139 aa10.13□□□□□ -0.79
SCG3-202ENST00000542355 C19orf25Q9UFG5 118 aaPredicted RBP10.13□□□□□ -0.79
SCG3-202ENST00000542355 NXT1Q9UKK6 140 aaKnown RBP10.13□□□□□ -0.79
SCG3-202ENST00000542355 PTRH2Q9Y3E5 179 aaKnown RBP10.13□□□□□ -0.79
SCG3-202ENST00000542355 HSPE1-MOB4S4R3N1 261 aa10.13□□□□□ -0.79
SCG3-202ENST00000542355 FER1L5A0AVI2 2057 aa10.13□□□□□ -0.79
SCG3-202ENST00000542355 NINQ8N4C6 2090 aa10.13□□□□□ -0.79
SCG3-202ENST00000542355 COL5A1P20908 1838 aaPredicted RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 TMX2-CTNND1H3BSU7 103 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 TO15178 435 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 ICOSLGO75144 302 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 KLF7O75840 302 aaPredicted RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 CRHBPP24387 322 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 FMO3P31513 532 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 COX10Q12887 443 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 MAD2L1BPQ15013 274 aaPredicted RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 NCF4Q15080 339 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 ZSWIM7Q19AV6 140 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 RBM48Q5RL73 367 aaKnown RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 CDCP2Q5VXM1 449 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 FAM198BQ6UWH4 519 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 ZNF550Q7Z398 422 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 SLCO6A1Q86UG4 719 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 NRMQ8IXM6 262 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 CMIPQ8IY22 773 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 ENTHD1Q8IYW4 607 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 ZNF441Q8N8Z8 693 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 PHOSPHO1Q8TCT1 267 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 GNPDA2Q8TDQ7 276 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 FBLIM1Q8WUP2 373 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 OMA1Q96E52 524 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 HSPBAP1Q96EW2 488 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 FAM46AQ96IP4 442 aaKnown RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 PRSS27Q9BQR3 290 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 POLR2J2Q9GZM3 115 aaKnown RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 EVA1AQ9H8M9 152 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 ZBTB20Q9HC78 741 aaPredicted RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 RNF6Q9Y252 685 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 CFAP54Q96N23 3096 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 A0A087WXM4 84 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 TRIM64A6NGJ6 449 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 ZAR1LA6NP61 321 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 PTGES3LE9PB15 166 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 TSPAN2O60636 221 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 ANGPTL1O95841 491 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 TBXA2RP21731 343 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 RPL5P46777 297 aaKnown RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 OMPP47874 163 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 TRIP6Q15654 476 aaKnown RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 CD226Q15762 336 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 SMN1Q16637 294 aaKnown RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 ZNF613Q6PF04 617 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 WDR88Q6ZMY6 472 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 MBOAT2Q6ZWT7 520 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 SATL1Q86VE3 508 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 CADM2Q8N3J6 435 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 TOR1AIP2Q8NFQ8 470 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 PIGXQ8TBF5 258 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 VMP1Q96GC9 406 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 TAAR9Q96RI9 348 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 PPIEQ9UNP9 301 aaKnown RBP10.12□□□□□ -0.79
SCG3-202ENST00000542355 SLC35A3Q9Y2D2 325 aa10.12□□□□□ -0.79
SCG3-202ENST00000542355 TRBV11-1A0A0K0K1C0 115 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 A0A1B0GWA3 101 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 GTPBP1O00178 669 aaKnown RBP10.11□□□□□ -0.79
SCG3-202ENST00000542355 SLC1A7O00341 560 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 XPNPEP2O43895 674 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 LYPD3O95274 346 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 UMODP07911 640 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 TGM1P22735 817 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 GPR4P46093 362 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 HLCSP50747 726 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 NRG3P56975 720 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 NUP107P57740 925 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 SLC26A5P58743 744 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 ALDH6A1Q02252 535 aaKnown RBP10.11□□□□□ -0.79
SCG3-202ENST00000542355 CD300LDQ6UXZ3 194 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 LHFPL2Q6ZUX7 228 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 SLC34A3Q8N130 599 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 LSMEM1Q8N8F7 131 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 C17orf47Q8NEP4 570 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 TMEM239Q8WW34 195 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 SGCDQ92629 289 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 TP53INP1Q96A56 240 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 MPP4Q96JB8 637 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 POLR1BQ9H9Y6 1135 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 PADI1Q9ULC6 663 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 CARD8Q9Y2G2 431 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 PCDHGA1Q9Y5H4 931 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 A0A0B4J2E0 115 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.11□□□□□ -0.79
SCG3-202ENST00000542355 A0A1B0GX12 115 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 M0R129 80 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 WWP2O00308 870 aa10.11□□□□□ -0.79
SCG3-202ENST00000542355 KPNA4O00629 521 aaPredicted RBP10.11□□□□□ -0.79
SCG3-202ENST00000542355 PLD2O14939 933 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms