RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 TRIM51Q9BSJ1 452 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 CNPY3Q9BT09 278 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 FRMD8P1Q9BZ68 369 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 HDHD2Q9H0R4 259 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 BLZF1Q9H2G9 400 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 RHBGQ9H310 441 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 PIGUQ9H490 435 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 RIBC2Q9H4K1 309 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 RNF41Q9H4P4 317 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 C11orf49Q9H6J7 331 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 METTL8Q9H825 291 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 RMND5AQ9H871 391 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ECT2Q9H8V3 914 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 LRRC40Q9H9A6 602 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 NT5MQ9NPB1 228 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 RGS18Q9NS28 235 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ACOXLQ9NUZ1 547 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 FGFR1OP2Q9NVK5 253 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 RNF186Q9NXI6 227 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 NDE1Q9NXR1 346 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 TMOD3Q9NYL9 352 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 TAS2R1Q9NYW7 299 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 STOML2Q9UJZ1 356 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 PLA2G4CQ9UP65 541 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 PPP2R2CQ9Y2T4 447 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ARL2BPQ9Y2Y0 163 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 MRPS2Q9Y399 296 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 UTP11Q9Y3A2 253 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 MFHAS1Q9Y4C4 1052 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ASB4Q9Y574 426 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 EIF2AK4Q9P2K8 1649 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 PTPRTO14522 1441 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 MED23Q9ULK4 1368 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CLUHO75153 1309 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 IGLV7-46A0A075B6I9 117 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 A0A087WZY1 265 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 A0A1W2PRG6 482 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 ZNF487B1APH4 448 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 F8WDY8 70 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 H0Y8G0 127 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CCL24O00175 119 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 TRAFD1O14545 582 aaPredicted RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 CHEK1O14757 476 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 TFECO14948 347 aaPredicted RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 SYT7O43581 403 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CST8O60676 142 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 MAGEC1O60732 1142 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 TOM1O60784 492 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CSDE1O75534 798 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 STBD1O95210 358 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 DIRAS3O95661 229 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 RAB3DO95716 219 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 TGM6O95932 706 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CHRNGP07510 517 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 FGF4P08620 206 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 STSP08842 583 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 HBQ1P09105 142 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 ZNF883P0CG24 379 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 DBTP11182 482 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 NCF1P14598 390 aaPredicted RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 CBR1P16152 277 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 S100PP25815 95 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 RBMS1P29558 406 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 CCR1P32246 355 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 DUTP33316 252 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 CYLC1P35663 651 aaPredicted RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 KIR3DL2P43630 455 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 SERPINB9P50453 376 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 TNFSF10P50591 281 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CDK9P50750 372 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 RAB13P51153 203 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 P2RY4P51582 365 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 RIDAP52758 137 aaKnown RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 KCNK10P57789 538 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 NCALDP61601 193 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 SKP1P63208 163 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 MYL7Q01449 175 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 ZNF33AQ06730 810 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CDH17Q12864 832 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 SPP2Q13103 211 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 PDZK1IP1Q13113 114 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 STX5Q13190 355 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CDH18Q13634 790 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CARTPTQ16568 116 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 GPR33Q49SQ1 333 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 C2CD6Q53TS8 623 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 FGD3Q5JSP0 725 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 BEND3Q5T5X7 828 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 AGBL2Q5U5Z8 902 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 RESP18Q5W5W9 173 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 SLC25A24Q6NUK1 477 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 XKRXQ6PP77 449 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 METAP1DQ6UB28 335 aaPredicted RBP2.79□□□□□ -1.96
USP28-210ENST00000542033 C5orf46Q6UWT4 87 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CDHR3Q6ZTQ4 885 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 COX8CQ7Z4L0 72 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 CROCCP2Q86T23 111 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 HORMAD1Q86X24 394 aa2.79□□□□□ -1.96
USP28-210ENST00000542033 PHC2Q8IXK0 858 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms