RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 LOC100653049A0A140TA62 436 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 PRAMEF25A6NGN4 478 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 AHRRA9YTQ3 701 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 HMGN4O00479 90 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 FADS1O60427 444 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 ICOSLGO75144 302 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 TRIM3O75382 744 aaPredicted RBP7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 KRT34O76011 436 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 UTS2O95399 124 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 EPPINO95925 133 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 C1QCP02747 245 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 HRGP04196 525 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 OR12D1P0DN82 309 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 BMP2P12643 396 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 COX4I1P13073 169 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 CYP4B1P13584 511 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 GPX2P18283 190 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 ATP6V1C1P21283 382 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 CEACAM8P31997 349 aaPredicted RBP7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 EVI2BP34910 448 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 PTGDSP41222 190 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 CPA2P48052 419 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 NFYCQ13952 458 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 TOMM20Q15388 145 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 RGNQ15493 299 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 TRMT5Q32P41 509 aaKnown RBP7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 FBXL19-AS1Q494R0 122 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 MMEL1Q495T6 779 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 ACSF3Q4G176 576 aaPredicted RBP7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 RUNDC3AQ59EK9 446 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 COX20Q5RI15 118 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 REP15Q6BDI9 236 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 DESI1Q6ICB0 168 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 FIGNL1Q6PIW4 674 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 ANGPTL8Q6UXH0 198 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 YTHDF3Q7Z739 585 aaKnown RBP7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 LUZP2Q86TE4 346 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 TREML1Q86YW5 311 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 LACC1Q8IV20 430 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 PCYOX1LQ8NBM8 494 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 CCDC197Q8NCU1 140 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 XAGE5Q8WWM1 108 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 OIT3Q8WWZ8 545 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 PMM1Q92871 262 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 CMTM5Q96DZ9 223 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 OTUB1Q96FW1 271 aaPredicted RBP7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 PERPQ96FX8 193 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 AURKBQ96GD4 344 aaPredicted RBP7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 TMEM41AQ96HV5 264 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 ANKRD27Q96NW4 1050 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 LRRC37BQ96QE4 947 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 CGREF1Q99674 301 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 CPPED1Q9BRF8 314 aaPredicted RBP7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 DOHHQ9BU89 302 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 OSBPL11Q9BXB4 747 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 ZNF350Q9GZX5 532 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 HOXD1Q9GZZ0 328 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 ZNF703Q9H7S9 590 aaPredicted RBP7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 METTL7AQ9H8H3 244 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 HHATLQ9HCP6 504 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 ZFP64Q9NPA5 681 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 UBQLN4Q9NRR5 601 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 GID8Q9NWU2 228 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 LIPT1Q9Y234 373 aa7.88□□□□□ -1.15
CLSTN3-212ENST00000541770 A0A1W2PPR1 153 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 A0A1W2PQD3 144 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 PRAMEF27A3QJZ7 478 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 SH3D21A4FU49 640 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 TRIM64A6NGJ6 449 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 TRIM64BA6NI03 449 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 EVPLLA8MZ36 301 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 ALG1L2C9J202 215 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 NPIPB9F8W1W9 429 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 NDUFAB1O14561 156 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 MRASO14807 208 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 TNFRSF21O75509 655 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 STX11O75558 287 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 OXSR1O95747 527 aaPredicted RBP7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 ETFAP13804 333 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 TBXA2RP21731 343 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 CTSSP25774 331 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 OPRM1P35372 400 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 TIMP3P35625 211 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 CRATP43155 626 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 RFX3P48380 749 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 CLK3P49761 638 aaKnown RBP7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 ATP12AP54707 1039 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 GAS1P54826 345 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 CASP9P55211 416 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 DSTNP60981 165 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 FUT5Q11128 374 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 CCNJQ5T5M9 372 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 BICRALQ6AI39 1079 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 POMZP3Q6PJE2 187 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 C16orf62Q7Z3J2 963 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 ZAR1Q86SH2 424 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 PACS2Q86VP3 889 aa7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 CXorf67Q86X51 503 aaPredicted RBP7.87□□□□□ -1.15
CLSTN3-212ENST00000541770 METTL25Q8N6Q8 603 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms